1LM5
Structures of two intermediate filament-binding fragments of desmoplakin reveal a unique repeat motif structure
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1lm5a_ | Alpha and beta proteins (a+b) | beta-hairpin-alpha-hairpin repeat | Plakin repeat | Plakin repeat | Desmoplakin intermediate filament-binding domains, domain C | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1lm5b_ | Alpha and beta proteins (a+b) | beta-hairpin-alpha-hairpin repeat | Plakin repeat | Plakin repeat | Desmoplakin intermediate filament-binding domains, domain C | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Plakin repeat | 8004058 | 3000152 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Desmoplakin intermediate filament-binding domain-like | 8004056 | 4000365 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Plakin repeat | 8004058 | 3000152 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Plectin | e1lm5A1 | A: a+b duplicates or obligate multimers | X: beta-hairpin-alpha-hairpin repeat (From Topology) | H: beta-hairpin-alpha-hairpin repeat (From Topology) | T: beta-hairpin-alpha-hairpin repeat | F: Plectin | ECOD (1.6) |
B | Plectin | e1lm5B1 | A: a+b duplicates or obligate multimers | X: beta-hairpin-alpha-hairpin repeat (From Topology) | H: beta-hairpin-alpha-hairpin repeat (From Topology) | T: beta-hairpin-alpha-hairpin repeat | F: Plectin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1290.10 | Alpha Beta | Alpha-Beta Complex | beta-hairpin-alpha-hairpin repeat | Plakin repeat | CATH (4.3.0) |
B | 3.90.1290.10 | Alpha Beta | Alpha-Beta Complex | beta-hairpin-alpha-hairpin repeat | Plakin repeat | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00681 | Plectin repeat (Plectin) | Plectin repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041615 | Desmoplakin, SH3 domain | Domain | |
IPR043197 | Plakin | Family | |
IPR001101 | Plectin repeat | Repeat | |
IPR035915 | Plakin repeat superfamily | Homologous Superfamily | |
IPR001452 | SH3 domain | Domain | |
IPR018159 | Spectrin/alpha-actinin | Repeat | |
IPR041573 | Desmoplakin, spectrin-like domain | Domain |