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 1LF6 | pdb_00001lf6

CRYSTAL STRUCTURE OF BACTERIAL GLUCOAMYLASE

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1lf6b1 All alpha proteins alpha/alpha toroid Six-hairpin glycosidases Bacterial glucoamylase C-terminal domain-like Bacterial glucoamylase, C-terminal domain (Thermoanaerobacterium thermosaccharolyticum ) [TaxId: 1517 ], SCOPe (2.08)
Bd1lf6b2 All beta proteins Supersandwich Galactose mutarotase-like Bacterial glucoamylase N-terminal domain-like Bacterial glucoamylase, N-terminal domain (Thermoanaerobacterium thermosaccharolyticum ) [TaxId: 1517 ], SCOPe (2.08)
Ad1lf6a1 All alpha proteins alpha/alpha toroid Six-hairpin glycosidases Bacterial glucoamylase C-terminal domain-like Bacterial glucoamylase, C-terminal domain (Thermoanaerobacterium thermosaccharolyticum ) [TaxId: 1517 ], SCOPe (2.08)
Ad1lf6a2 All beta proteins Supersandwich Galactose mutarotase-like Bacterial glucoamylase N-terminal domain-like Bacterial glucoamylase, N-terminal domain (Thermoanaerobacterium thermosaccharolyticum ) [TaxId: 1517 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilySix-hairpin glycosidases 8042992 3000970 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGalactose mutarotase-like 8042995 3000035 SCOP2B (2022-06-29)
ASCOP2 FamilyBacterial glucoamylase C-terminal domain-like 8030613 4002437 SCOP2 (2022-06-29)
ASCOP2 FamilyBacterial glucoamylase N-terminal domain-like 8030616 4002563 SCOP2 (2022-06-29)
ASCOP2 SuperfamilySix-hairpin glycosidases 8042992 3000970 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGalactose mutarotase-like 8042995 3000035 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BLdl_recept_be1lf6B1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Ldl_recept_bECOD (v295.2)
BAnk+Ank_2+Ank_4e1lf6B2 A: alpha arraysX: Urease, gamma-subunitH: Urease, gamma-subunitT: Urease, gamma-subunitF: Ank+Ank_2+Ank_4ECOD (v295.2)
AGlucodextran_Ne1lf6A1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: supersandwichT: supersandwichF: Glucodextran_NECOD (v295.2)
AGlyco_hydro_15e1lf6A2 A: alpha bundlesX: Repetitive alpha hairpinsH: alpha/alpha toroidT: alpha/alpha toroidF: Glyco_hydro_15ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.70.98.10 Mainly Beta Distorted Sandwich Beta-galactosidase Chain A, domain 5CATH (4.3.0)
B1.50.10.10 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)
A2.70.98.10 Mainly Beta Distorted Sandwich Beta-galactosidase Chain A, domain 5CATH (4.3.0)
A1.50.10.10 Mainly Alpha Alpha/alpha barrel Glycosyltransferase CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
glucoamylase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR012341Six-hairpin glycosidase-like superfamilyHomologous Superfamily
A, B
IPR015220Glucodextranase, N-terminalDomain
A, B
IPR046966Glucoamylase, active siteConserved Site
A, B
IPR006425Glucoamylase, bacterialFamily
A, B
IPR008928Six-hairpin glycosidase superfamilyHomologous Superfamily
A, B
IPR014718Glycoside hydrolase-type carbohydrate-bindingHomologous Superfamily
A, B
IPR011613GH15-like domainDomain
A, B
IPR011013Galactose mutarotase-like domain superfamilyHomologous Superfamily