1L9N
Three-dimensional structure of the human transglutaminase 3 enzyme: binding of calcium ions change structure for activation
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | E set domains | 8055035 | 3000070 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055478 | 3002048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055227 | 3002048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cysteine proteinases | 8041161 | 3001808 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | E set domains | 8055035 | 3000070 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cysteine proteinases | 8041161 | 3001808 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055227 | 3002048 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | CsgC/transglutaminase domain-like | 8055478 | 3002048 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Transglut_N | e1l9nB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_N | ECOD (1.6) |
B | Transglut_C_1 | e1l9nB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C_1 | ECOD (1.6) |
B | Transglut_C | e1l9nB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C | ECOD (1.6) |
B | Transglut_core | e1l9nB4 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: Transglut_core | ECOD (1.6) |
A | Transglut_N | e1l9nA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_N | ECOD (1.6) |
A | Transglut_C_1 | e1l9nA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C_1 | ECOD (1.6) |
A | Transglut_C | e1l9nA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Transglut_C | ECOD (1.6) |
A | Transglut_core | e1l9nA4 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: Transglut_core | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 3.90.260.10 | Alpha Beta | Alpha-Beta Complex | Coagulation Factor XIII | Chain A, domain 2 | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 3.90.260.10 | Alpha Beta | Alpha-Beta Complex | Coagulation Factor XIII | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00868 | Transglutaminase family (Transglut_N) | Transglutaminase family | - | Domain | |
PF00927 | Transglutaminase family, C-terminal ig like domain (Transglut_C) | Transglutaminase family, C-terminal ig like domain | - | Domain | |
PF01841 | Transglutaminase-like superfamily (Transglut_core) | Transglutaminase-like superfamily | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036985 | Transglutaminase-like superfamily | Homologous Superfamily | |
IPR036238 | Transglutaminase, C-terminal domain superfamily | Homologous Superfamily | |
IPR002931 | Transglutaminase-like | Domain | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily | |
IPR001102 | Transglutaminase, N-terminal | Domain | |
IPR008958 | Transglutaminase, C-terminal | Domain | |
IPR050779 | Protein-glutamine gamma-glutamyltransferases | Family | |
IPR023608 | Protein-glutamine gamma-glutamyltransferase, animal | Family | |
IPR013808 | Transglutaminase, active site | Active Site | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q08188 | :