1L5A
Crystal Structure of VibH, an NRPS Condensation Enzyme
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d1l5ac1 | Alpha and beta proteins (a/b) | CoA-dependent acyltransferases | CoA-dependent acyltransferases | NRPS condensation domain (amide synthase) | VibH | (Vibrio cholerae ) [TaxId: 666 ], | SCOPe (2.08) |
A | d1l5aa1 | Alpha and beta proteins (a/b) | CoA-dependent acyltransferases | CoA-dependent acyltransferases | NRPS condensation domain (amide synthase) | VibH | (Vibrio cholerae ) [TaxId: 666 ], | SCOPe (2.08) |
B | d1l5ab1 | Alpha and beta proteins (a/b) | CoA-dependent acyltransferases | CoA-dependent acyltransferases | NRPS condensation domain (amide synthase) | VibH | (Vibrio cholerae ) [TaxId: 666 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | CoA-dependent acyltransferases | 8042137 | 3000272 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CoA-dependent acyltransferases | 8042138 | 3000272 | SCOP2B (2022-06-29) |
A | SCOP2 Family | NRPS condensation domain (amide synthase) | 8029758 | 4002358 | SCOP2 (2022-06-29) |
A | SCOP2 Family | NRPS condensation domain (amide synthase) | 8029759 | 4002358 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CoA-dependent acyltransferases | 8042137 | 3000272 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CoA-dependent acyltransferases | 8042138 | 3000272 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | CoA-dependent acyltransferases | 8042138 | 3000272 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CoA-dependent acyltransferases | 8042137 | 3000272 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Condensation_N | e1l5aC1 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: Condensation_N | ECOD (1.6) |
C | Condensation_C_1 | e1l5aC2 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: Condensation_C_1 | ECOD (1.6) |
A | Condensation_N | e1l5aA1 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: Condensation_N | ECOD (1.6) |
A | Condensation_C_1 | e1l5aA2 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: Condensation_C_1 | ECOD (1.6) |
B | Condensation_N | e1l5aB1 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: Condensation_N | ECOD (1.6) |
B | Condensation_C_1 | e1l5aB2 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: Condensation_C_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00668 | Condensation domain (Condensation) | Condensation domain | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
amide synthase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023213 | Chloramphenicol acetyltransferase-like domain superfamily | Homologous Superfamily | |
IPR001242 | Condensation domain | Domain |