1L0Q
Tandem YVTN beta-propeller and PKD domains from an archaeal surface layer protein
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | YVTN repeat | 8030486 | 4002745 | SCOP2 (2022-06-29) |
A | SCOP2 Family | PKD domain | 8055204 | 4007526 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | YVTN repeat-like/Quinoprotein amine dehydrogenase | 8042865 | 3001671 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | PKD domain | 8055205 | 3002045 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | PKD domain | 8055205 | 3002045 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | YVTN repeat-like/Quinoprotein amine dehydrogenase | 8042865 | 3001671 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PKD domain | 8055205 | 3002045 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | YVTN repeat-like/Quinoprotein amine dehydrogenase | 8042865 | 3001671 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | YVTN repeat-like/Quinoprotein amine dehydrogenase | 8042865 | 3001671 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PKD domain | 8055205 | 3002045 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PKD | e1l0qA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PKD | ECOD (1.6) |
A | Lactonase_1 | e1l0qA2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Lactonase_1 | ECOD (1.6) |
B | PKD | e1l0qB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PKD | ECOD (1.6) |
B | Lactonase_1 | e1l0qB2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Lactonase_1 | ECOD (1.6) |
C | PKD | e1l0qC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PKD | ECOD (1.6) |
C | Lactonase_1 | e1l0qC2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Lactonase_1 | ECOD (1.6) |
D | PKD | e1l0qD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PKD | ECOD (1.6) |
D | Lactonase_1 | e1l0qD2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Lactonase_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011045 | Nitrous oxide reductase, N-terminal | Homologous Superfamily | |
IPR035986 | PKD domain superfamily | Homologous Superfamily | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR022409 | PKD/Chitinase domain | Domain | |
IPR000601 | PKD domain | Domain | |
IPR011964 | YVTN beta-propeller repeat | Repeat | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
IPR048433 | YNCE-like beta-propeller | Domain | |
IPR051200 | Multi-functional host-pathogen interaction and enzymatic activity protein | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | Beta propellers | Lactonase, 7-bladed beta-propeller |