Crystal structure of 4-alpha-glucanotransferase from thermococcus litoralis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1k1wa1 | All alpha proteins | immunoglobulin/albumin-binding domain-like | Families 57/38 glycoside transferase middle domain | 4-alpha-glucanotransferase, domain 2 | 4-alpha-glucanotransferase, domain 2 | (Thermococcus litoralis ) [TaxId: 2265 ], | SCOPe (2.08) |
| A | d1k1wa2 | All beta proteins | Supersandwich | Galactose mutarotase-like | 4-alpha-glucanotransferase, C-terminal domain | 4-alpha-glucanotransferase, C-terminal domain | (Thermococcus litoralis ) [TaxId: 2265 ], | SCOPe (2.08) |
| A | d1k1wa3 | Alpha and beta proteins (a/b) | 7-stranded beta/alpha barrel | Glycoside hydrolase/deacetylase | 4-alpha-glucanotransferase, N-terminal domain | 4-alpha-glucanotransferase, N-terminal domain | (Thermococcus litoralis ) [TaxId: 2265 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | Families 57/38 glycoside transferase middle domain | 8032319 | 3000997 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Glycoside hydrolase/deacetylase | 8032321 | 3001025 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Galactose mutarotase-like | 8032320 | 3000035 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Ldl_recept_b | e1k1wA1 | A: alpha arrays | X: Phage tail fiber protein trimerization domain | H: Phage tail fiber protein trimerization domain | T: Phage tail fiber protein trimerization domain | F: Ldl_recept_b | ECOD (v295.2) |
| A | Evr1_Alr | e1k1wA2 | A: alpha arrays | X: Urease, gamma-subunit | H: p53 tetramerization domain | T: p53 tetramerization domain | F: Evr1_Alr | ECOD (v295.2) |
| A | NAD_binding_3 | e1k1wA3 | A: alpha arrays | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: C-terminal subdomain in Lon-related proteases catalytic domains | F: NAD_binding_3 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.20.110.20 | Alpha Beta | Alpha-Beta Barrel | 7-stranded beta/alpha barrel | CATH (4.3.0) | |
| A | 2.70.98.10 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| 4-ALPHA-GLUCANOTRANSFERASE | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011330 | Glycoside hydrolase/deacetylase, beta/alpha-barrel | Homologous Superfamily | |
| IPR028995 | Glycoside hydrolase families 57/38, central domain superfamily | Homologous Superfamily | |
| IPR015178 | Alpha-amylase/4-alpha-glucanotransferase, central domain | Domain | |
| IPR004300 | Glycoside hydrolase family 57, N-terminal domain | Domain | |
| IPR015179 | Alpha-amylase/4-alpha-glucanotransferase, C-terminal | Domain | |
| IPR052046 | Glycosyl hydrolase family 57 | Family | |
| IPR014718 | Glycoside hydrolase-type carbohydrate-binding | Homologous Superfamily | |
| IPR011013 | Galactose mutarotase-like domain superfamily | Homologous Superfamily |