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 1JOG | pdb_00001jog

Structure of HI0074 from Heamophilus Influenzae reveals the fold of a substrate binding domain of a nucleotidyltransferase

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd1jogd_ All alpha proteins Four-helical up-and-down bundle Nucleotidyltransferase substrate binding subunit/domain Family 1 bi-partite nucleotidyltransferase subunit Hypothetical protein HI0074 (Haemophilus influenzae ) [TaxId: 727 ], SCOPe (2.08)
Cd1jogc_ All alpha proteins Four-helical up-and-down bundle Nucleotidyltransferase substrate binding subunit/domain Family 1 bi-partite nucleotidyltransferase subunit Hypothetical protein HI0074 (Haemophilus influenzae ) [TaxId: 727 ], SCOPe (2.08)
Bd1jogb_ All alpha proteins Four-helical up-and-down bundle Nucleotidyltransferase substrate binding subunit/domain Family 1 bi-partite nucleotidyltransferase subunit Hypothetical protein HI0074 (Haemophilus influenzae ) [TaxId: 727 ], SCOPe (2.08)
Ad1joga_ All alpha proteins Four-helical up-and-down bundle Nucleotidyltransferase substrate binding subunit/domain Family 1 bi-partite nucleotidyltransferase subunit Hypothetical protein HI0074 (Haemophilus influenzae ) [TaxId: 727 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyHEPN domain-like 8042652 3000904 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyHEPN domain-like 8042652 3000904 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyHEPN domain-like 8042652 3000904 SCOP2B (2022-06-29)
ASCOP2 FamilyFamily 1 bi-partite nucleotidyltransferase subunit 8030273 4002311 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHEPN domain-like 8042652 3000904 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DEvr1_Alre1jogD1 A: alpha arraysX: Urease, gamma-subunitH: p53 tetramerization domainT: p53 tetramerization domainF: Evr1_AlrECOD (v295.2)
CEvr1_Alre1jogC1 A: alpha arraysX: Urease, gamma-subunitH: p53 tetramerization domainT: p53 tetramerization domainF: Evr1_AlrECOD (v295.2)
BEvr1_Alre1jogB1 A: alpha arraysX: Urease, gamma-subunitH: p53 tetramerization domainT: p53 tetramerization domainF: Evr1_AlrECOD (v295.2)
ANTase_sub_binde1jogA1 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: NTase_sub_bindECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D1.20.120.330 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nucleotidyltransferases domain 2CATH (4.3.0)
C1.20.120.330 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nucleotidyltransferases domain 2CATH (4.3.0)
B1.20.120.330 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nucleotidyltransferases domain 2CATH (4.3.0)
A1.20.120.330 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Nucleotidyltransferases domain 2CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR010235Probable ribonuclease HepTFamily