1JMM
Crystal structure of the V-region of Streptococcus mutans antigen I/II
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1jmma_ | All beta proteins | Supersandwich | V-region of surface antigen I/II (SA I/II, PAC) | V-region of surface antigen I/II (SA I/II, PAC) | V-region of surface antigen I/II (SA I/II, PAC) | (Streptococcus mutans ) [TaxId: 1309 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GbpC | e1jmmA1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: V-region of surface antigen I/II (SA I/II, PAC) (From Topology) | T: V-region of surface antigen I/II (SA I/II, PAC) | F: GbpC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.250 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
A | 2.60.530.10 | Mainly Beta | Sandwich | Major cell-surface adhesin PAc | Major cell-surface adhesin PAc | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08363 | Glucan-binding protein C (GbpC) | Glucan-binding protein C | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR013574 | Glucan-binding protein C/Surface antigen I/II, V-domain | Domain | |
IPR041324 | Antigen I/II, N-terminal | Domain | |
IPR026345 | Adhesin isopeptide-forming adherence domain | Domain | |
IPR021197 | Cross-wall-targeting lipoprotein motif | Conserved Site | |
IPR009578 | Cell surface antigen I/II A repeat | Repeat | |
IPR032300 | Cell surface antigen, C-terminal | Domain | |
IPR036234 | Glucan-binding protein C/Surface antigen I/II, V-domain superfamily | Homologous Superfamily | |
IPR019931 | LPXTG cell wall anchor domain | Domain |