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 1IBY | pdb_00001iby

RED COPPER PROTEIN NITROSOCYANIN FROM NITROSOMONAS EUROPAEA

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd1ibyd_ All beta proteins Cupredoxin-like Cupredoxins Nitrosocyanin Red copper protein nitrosocyanin (Nitrosomonas europaea ) [TaxId: 915 ], SCOPe (2.08)
Cd1ibyc_ All beta proteins Cupredoxin-like Cupredoxins Nitrosocyanin Red copper protein nitrosocyanin (Nitrosomonas europaea ) [TaxId: 915 ], SCOPe (2.08)
Bd1ibyb_ All beta proteins Cupredoxin-like Cupredoxins Nitrosocyanin Red copper protein nitrosocyanin (Nitrosomonas europaea ) [TaxId: 915 ], SCOPe (2.08)
Ad1ibya_ All beta proteins Cupredoxin-like Cupredoxins Nitrosocyanin Red copper protein nitrosocyanin (Nitrosomonas europaea ) [TaxId: 915 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyCupredoxins 8033882 3000886 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCupredoxins 8033882 3000886 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCupredoxins 8033882 3000886 SCOP2B (2022-06-29)
ASCOP2 FamilyNitrosocyanin 8021502 4002857 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCupredoxins 8033882 3000886 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DLdl_recept_be1ibyD1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Ldl_recept_bECOD (v295.2)
CLdl_recept_be1ibyC1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Ldl_recept_bECOD (v295.2)
BLdl_recept_be1ibyB1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Ldl_recept_bECOD (v295.2)
ACupredoxin_1e1ibyA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Cupredoxin-relatedT: Cupredoxin-relatedF: Cupredoxin_1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
C2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
B2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)
A2.60.40.420 Mainly Beta Sandwich Immunoglobulin-like Cupredoxins - blue copper proteinsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13473Cupredoxin-like domain (Cupredoxin_1)Cupredoxin-like domainThe cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR008972CupredoxinHomologous Superfamily
A, B, C, D
IPR017527NitrosocyaninFamily
A, B, C, D
IPR028096EfeO-type cupredoxin-like domainDomain