1HMD
THE STRUCTURE OF DEOXY AND OXY HEMERYTHRIN AT 2.0 ANGSTROMS RESOLUTION
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1hmda_ | All alpha proteins | Four-helical up-and-down bundle | Hemerythrin-like | Hemerythrin-like | Hemerythrin | (Themiste dyscritum ) [TaxId: 6436 ], | SCOPe (2.08) |
B | d1hmdb_ | All alpha proteins | Four-helical up-and-down bundle | Hemerythrin-like | Hemerythrin-like | Hemerythrin | (Themiste dyscritum ) [TaxId: 6436 ], | SCOPe (2.08) |
C | d1hmdc_ | All alpha proteins | Four-helical up-and-down bundle | Hemerythrin-like | Hemerythrin-like | Hemerythrin | (Themiste dyscritum ) [TaxId: 6436 ], | SCOPe (2.08) |
D | d1hmdd_ | All alpha proteins | Four-helical up-and-down bundle | Hemerythrin-like | Hemerythrin-like | Hemerythrin | (Themiste dyscritum ) [TaxId: 6436 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Hemerythrin-like | 8018740 | 3001568 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Hemerythrin-like | 8018740 | 3001568 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | Hemerythrin-like | 8018740 | 3001568 | SCOP2B (2021-05-27) |
D | SCOP2B Superfamily | Hemerythrin-like | 8018740 | 3001568 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01814 | e1hmdA1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Hemerythrin (From Topology) | T: Hemerythrin | F: PF01814 | ECOD (1.6) |
B | PF01814 | e1hmdB1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Hemerythrin (From Topology) | T: Hemerythrin | F: PF01814 | ECOD (1.6) |
C | PF01814 | e1hmdC1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Hemerythrin (From Topology) | T: Hemerythrin | F: PF01814 | ECOD (1.6) |
D | PF01814 | e1hmdD1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Hemerythrin (From Topology) | T: Hemerythrin | F: PF01814 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.50 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Hemerythrin-like | CATH (4.3.0) |
B | 1.20.120.50 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Hemerythrin-like | CATH (4.3.0) |
C | 1.20.120.50 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Hemerythrin-like | CATH (4.3.0) |
D | 1.20.120.50 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Hemerythrin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01814 | Hemerythrin HHE cation binding domain (Hemerythrin) | Hemerythrin HHE cation binding domain | Iteration of the HHE family ([2]) found it to be related to Hemerythrin. It also demonstrated that what has been described as a single domain ([1]) in fact consists of two cation binding domains. Members of this family occur all across nature and are ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
HEMERYTHRIN | - |