1HK6 | pdb_00001hk6

Ral binding domain from Sec5

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1hk6a_	All beta proteins	Immunoglobulin-like beta-sandwich	E set domains	Other IPT/TIG domains	Exocyst complex component Sec5, Ral-binding domain	MOUSE (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Other IPT/TIG domains	8054958	4007563	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	E set domains	8054959	3000070	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Copper-bind	e1hk6A1	A: beta barrels	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01833	IPT/TIG domain (TIG)	IPT/TIG domain	This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family d ...	This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognise a significant number of members.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	EXOCYST COMPLEX COMPONENT SEC5	small GTPase binding protein binding binding enzyme binding GTPase binding kinase binding protein kinase binding	membrane organization cellular component organization membrane fission cellular process cellular component organization or biogenesis Golgi to plasma membrane transport cellular localization post-Golgi vesicle-mediated transport transport localization within membrane establishment of localization vesicle-mediated transport vesicle-mediated transport to the plasma membrane localization membrane organization cellular component organization membrane fission cellular process cellular component organization or biogenesis Golgi to plasma membrane transport cellular localization post-Golgi vesicle-mediated transport transport localization within membrane establishment of localization vesicle-mediated transport vesicle-mediated transport to the plasma membrane localization Golgi vesicle transport mitotic cell cycle process cytoskeleton-dependent cytokinesis mitotic cytokinesis cytokinesis cell division cell cycle mitotic cell cycle cell cycle process regulation of localization regulation of cellular process positive regulation of biological process positive regulation of secretion by cell positive regulation of exocytosis regulation of secretion by cell secretion by cell positive regulation of secretion positive regulation of cellular process regulation of biological process regulation of transport secretion biological regulation export from cell regulation of vesicle-mediated transport regulation of secretion positive regulation of transport exocytosis regulation of exocytosis establishment of protein localization protein transport macromolecule localization intracellular protein localization biological process involved in interspecies interaction between organisms entry of bacterium into host cell regulation of entry of bacterium into host cell symbiont entry into host modulation by symbiont of entry into host biological process involved in interaction with host biological process involved in symbiotic interaction regulation of biological process involved in symbiotic interaction membrane docking organelle localization by membrane tethering organelle localization vesicle docking exocytic process vesicle docking involved in exocytosis vesicle localization establishment of organelle localization establishment of vesicle localization vesicle targeting vesicle tethering involved in exocytosis establishment of localization in cell vesicle tethering	cell periphery cellular anatomical structure plasma membrane membrane Flemming body midbody protein-containing complex cell cortex intracellular anatomical structure exocyst cytoplasm vesicle tethering complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR002909	IPT domain	Domain
A	IPR029175	Exocyst complex component EXOC2/Sec5	Family
A	IPR039481	Exocyst complex component EXOC2/Sec5, N-terminal domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR014756	Immunoglobulin E-set	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.