1H6F
Human TBX3, a transcription factor responsible for ulnar-mammary syndrome, bound to a palindromic DNA site
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1h6fa_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | T-box | T-box protein 3, tbx3 | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1h6fb_ | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | p53-like transcription factors | T-box | T-box protein 3, tbx3 | HUMAN (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | T-box | 8027041 | 4001850 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | p53-like transcription factors | 8039420 | 3000758 | SCOP2 (2021-05-27) |
B | SCOP2B Superfamily | p53-like transcription factors | 8039420 | 3000758 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00907 | e1h6fA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00907 | ECOD (1.6) |
B | PF00907 | e1h6fB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00907 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.820 | Mainly Beta | Sandwich | Immunoglobulin-like | Transcription factor, T-box | CATH (4.3.0) |
B | 2.60.40.820 | Mainly Beta | Sandwich | Immunoglobulin-like | Transcription factor, T-box | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00907 | T-box (T-box) | T-box | The T-box encodes a 180 amino acid domain that binds to DNA. Genes encoding T-box proteins are found in a wide range of animals, but not in other kingdoms such as plants. Family members are all thought to bind to the DNA consensus sequence TCACACCT. ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001699 | T-box transcription factor | Family | |
IPR036960 | T-box superfamily | Homologous Superfamily | |
IPR048387 | T-box transcription factor 2/3, repressor domain | Domain | |
IPR046360 | T-box transcription factor, DNA-binding domain | Domain | |
IPR018186 | Transcription factor, T-box, conserved site | Conserved Site | |
IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR022582 | T-box transcription factor 2/3, transcription activation domain | Domain |