1H09
Multimodular Pneumococcal Cell Wall Endolysin from phage Cp-1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1h09a1 | All beta proteins | beta-hairpin stack | Cell wall binding repeat | Cell wall binding repeat | C-terminal domain of endolysin | (Streptococcus phage Cp1 ) [TaxId: 10747 ], | SCOPe (2.08) |
A | d1h09a2 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | 1,4-beta-N-acetylmuraminidase | N-terminal domain of endolysin | (Streptococcus phage Cp1 ) [TaxId: 10747 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01473 | e1h09A1 | A: beta duplicates or obligate multimers | X: beta-hairpin stack (From Topology) | H: beta-hairpin stack (From Topology) | T: beta-hairpin stack | F: PF01473 | ECOD (1.6) |
A | PF01183 | e1h09A2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01183 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 2.10.270.10 | Mainly Beta | Ribbon | left handed beta-beta-3-solenoid | Cholin Binding | CATH (4.3.0) |
A | 2.20.120.10 | Mainly Beta | Single Sheet | Multimodular pneumococcal cell wall endolysin, domain 3 | Multimodular pneumococcal cell wall endolysin, domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01183 | Glycosyl hydrolases family 25 (Glyco_hydro_25) | Glycosyl hydrolases family 25 | - | Domain | |
PF01473 | Putative cell wall binding repeat (Choline_bind_1) | Putative cell wall binding repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018077 | Glycoside hydrolase, family 25 subgroup | Family | |
IPR002053 | Glycoside hydrolase, family 25 | Family | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR008270 | Glycosyl hydrolases family 25, active site | Active Site | |
IPR018337 | Cell wall/choline-binding repeat | Repeat |