1GC7
CRYSTAL STRUCTURE OF THE RADIXIN FERM DOMAIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1gc7a1 | All alpha proteins | Acyl-CoA binding protein-like | Second domain of FERM | Second domain of FERM | Radixin | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d1gc7a2 | All beta proteins | PH domain-like barrel | PH domain-like | Third domain of FERM | Radixin | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d1gc7a3 | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Ubiquitin-like | First domain of FERM | Radixin | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PH domain-like | 8038751 | 3000134 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | FERM central domain-like | 8038749 | 3001227 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ubiquitin-like | 8038750 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FERM_C | e1gc7A1 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: FERM_C | ECOD (1.6) |
A | FERM_M | e1gc7A2 | A: alpha bundles | X: Acyl-CoA binding protein-like (From Topology) | H: Acyl-CoA binding protein-like (From Topology) | T: Acyl-CoA binding protein-like | F: FERM_M | ECOD (1.6) |
A | FERM_N | e1gc7A3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: FERM_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
A | 1.20.80.10 | Mainly Alpha | Up-down Bundle | Acyl-CoA Binding Protein | CATH (4.3.0) | |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09379 | FERM N-terminal domain (FERM_N) | FERM N-terminal domain | This domain is the N-terminal ubiquitin-like structural domain of the FERM domain. | Domain | |
PF09380 | FERM C-terminal PH-like domain (FERM_C) | FERM C-terminal PH-like domain | - | Domain | |
PF00373 | FERM central domain (FERM_M) | FERM central domain | This domain is the central structural domain of the FERM domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000299 | FERM domain | Domain | |
IPR019748 | FERM central domain | Domain | |
IPR018980 | FERM, C-terminal PH-like domain | Domain | |
IPR000798 | Ezrin/radixin/moesin-like | Family | |
IPR008954 | Moesin tail domain superfamily | Homologous Superfamily | |
IPR035963 | FERM superfamily, second domain | Homologous Superfamily | |
IPR011259 | Ezrin/radixin/moesin, C-terminal | Domain | |
IPR019747 | FERM conserved site | Conserved Site | |
IPR018979 | FERM, N-terminal | Domain | |
IPR014352 | FERM/acyl-CoA-binding protein superfamily | Homologous Superfamily | |
IPR041789 | ERM family, FERM domain C-lobe | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR046810 | Ezrin/radixin/moesin, alpha-helical domain | Domain | |
IPR019749 | Band 4.1 domain | Domain | |
IPR011174 | Ezrin/radixin/moesin | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |