BACTERIOPHAGE GA PROTEIN CAPSID
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| AA [auth 1] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| BA [auth 2] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| CA [auth 3] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| DA [auth 4] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| FA [auth 6] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| GA [auth 7] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| IA [auth 9] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| JA [auth 0] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| LA [auth b] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| NA [auth d] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| PA [auth f] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| QA [auth g] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| RA [auth h] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| SA [auth i] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| W | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| Z | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| OA [auth e] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| MA [auth c] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| KA [auth a] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| HA [auth 8] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
| EA [auth 5] | SCOP2B Superfamily | RNA bacteriophage capsid protein | 8035278 | 3001853 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | RWD | e1gavA1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| AA [auth 1] | RWD | e1gav11 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| B | RWD | e1gavB1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| BA [auth 2] | RWD | e1gav21 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| C | RWD | e1gavC1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| CA [auth 3] | RWD | e1gav31 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| D | RWD | e1gavD1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| DA [auth 4] | RWD | e1gav41 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| E | RWD | e1gavE1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| F | RWD | e1gavF1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| FA [auth 6] | RWD | e1gav61 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| G | RWD | e1gavG1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| GA [auth 7] | RWD | e1gav71 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| H | RWD | e1gavH1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| I | RWD | e1gavI1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| IA [auth 9] | RWD | e1gav91 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| J | RWD | e1gavJ1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| JA [auth 0] | RWD | e1gav01 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| K | RWD | e1gavK1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| L | RWD | e1gavL1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| LA [auth b] | PTN_MK_N | e1gavb1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| M | RWD | e1gavM1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| N | RWD | e1gavN1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| NA [auth d] | PTN_MK_N | e1gavd1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| O | RWD | e1gavO1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| P | RWD | e1gavP1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| PA [auth f] | PTN_MK_N | e1gavf1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| Q | RWD | e1gavQ1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| QA [auth g] | PTN_MK_N | e1gavg1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| R | RWD | e1gavR1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| RA [auth h] | PTN_MK_N | e1gavh1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| S | RWD | e1gavS1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| SA [auth i] | PTN_MK_N | e1gavi1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| T | RWD | e1gavT1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| U | RWD | e1gavU1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| V | RWD | e1gavV1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| W | RWD | e1gavW1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| X | RWD | e1gavX1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| Y | RWD | e1gavY1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| Z | RWD | e1gavZ1 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| OA [auth e] | PTN_MK_N | e1gave1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| MA [auth c] | PTN_MK_N | e1gavc1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| KA [auth a] | PTN_MK_N | e1gava1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain | T: 40S ribosomal protein S3A N-terminal domain | F: PTN_MK_N | ECOD (v294.2) |
| HA [auth 8] | RWD | e1gav81 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
| EA [auth 5] | RWD | e1gav51 | A: beta barrels | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: RWD | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01819 | Levivirus coat protein (Levi_coat) | Levivirus coat protein | The Levivirus coat protein forms the bacteriophage coat that encapsidates the viral RNA. 180 copies of this protein form the virion shell. The MS2 bacteriophage coat protein controls two distinct processes: sequence-specific RNA encapsidation and rep ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| BACTERIOPHAGE GA PROTEIN CAPSID | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR002703 | Levivirus coat protein | Family | |
| IPR015954 | Bacteriophage RNA-type, capsid | Homologous Superfamily |














