1FYH
1:1 COMPLEX BETWEEN AN INTERFERON GAMMA SINGLE-CHAIN VARIANT AND ITS RECEPTOR
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1fyha1 | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Interferons/interleukin-10 (IL-10) | Interferon-gamma | Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth D] | d1fyhd1 | All alpha proteins | 4-helical cytokines | 4-helical cytokines | Interferons/interleukin-10 (IL-10) | Interferon-gamma | Human (Homo sapiens ) [TaxId: 9606 ], Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1fyhb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | Fibronectin type III | Interferon-gamma receptor alpha chain | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth E] | d1fyhe1 | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | Fibronectin type III | Interferon-gamma receptor alpha chain | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 4-helical cytokines | 8039129 | 3001717 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | 4-helical cytokines | 8039129 | 3001717 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | 4-helical cytokines | 8039129 | 3001717 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | 4-helical cytokines | 8039129 | 3001717 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Fibronectin type III | 8055142 | 4007555 | SCOP2 (2022-06-29) |
B | SCOP2 Family | Fibronectin type III | 8055530 | 4007555 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Fibronectin type III | 8055143 | 3002063 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Fibronectin type III | 8055531 | 3002063 | SCOP2 (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Fibronectin type III | 8055143 | 3002063 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Fibronectin type III | 8055531 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IFN-gamma | e1fyhA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IFN-gamma | ECOD (1.6) |
C [auth D] | IFN-gamma | e1fyhD1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: IFN-gamma | ECOD (1.6) |
B | IFNGR1_1st | e1fyhB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: IFNGR1_1st | ECOD (1.6) |
B | Tissue_fac | e1fyhB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Tissue_fac | ECOD (1.6) |
D [auth E] | IFNGR1_1st | e1fyhE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: IFNGR1_1st | ECOD (1.6) |
D [auth E] | Tissue_fac | e1fyhE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Tissue_fac | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
C [auth D] | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth E] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
A, C [auth D] | IFNG (Interferon gamma) | IFNG | Homo sapiens (human) | IFNG*01 | R-LIKE-DOMAIN IFNG (Pr21-161) | RPI | IFNG | IMGT (202442-0) |
B, D [auth E] | IFNGR1 (Interferon gamma receptor alpha) | 1F-DOMAIN | Homo sapiens (human) | IFNGR1*01 | F-LIKE-DOMAIN F-DOMAIN | RPI | 1F-DOMAIN | IMGT (202442-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth D] | PF00714 | Interferon gamma (IFN-gamma) | Interferon gamma | - | Domain |
B, D [auth E] | PF07140 | Interferon gamma receptor (IFNGR1), D2 domain (IFNGR1_D2) | Interferon gamma receptor (IFNGR1), D2 domain | This entry consists of mammal and viral interferon gamma receptor proteins. Molecular interactions among cytokines and cytokine receptors in eukaryotes form the basis of many cell-signalling pathways relevant to immune function. Human interferon-gamm ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth D] | IPR002069 | Interferon gamma | Family |
A, C [auth D] | IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily |
B, D [auth E] | IPR008355 | Interferon gamma receptor alpha subunit | Family |
B, D [auth E] | IPR003961 | Fibronectin type III | Domain |
B, D [auth E] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
B, D [auth E] | IPR050650 | Type II Cytokine and Tissue Factor Receptors | Family |
B, D [auth E] | IPR021126 | Interferon gamma receptor, D2 domain, poxvirus/mammal | Domain |
B, D [auth E] | IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |