1FN9
CRYSTAL STRUCTURE OF THE REOVIRUS OUTER CAPSID PROTEIN SIGMA 3
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1fn9a_ | Alpha and beta proteins (a+b) | Outer capsid protein sigma 3 | Outer capsid protein sigma 3 | Outer capsid protein sigma 3 | Outer capsid protein sigma 3 | (Reovirus sp. ) [TaxId: 10891 ], | SCOPe (2.08) |
B | d1fn9b_ | Alpha and beta proteins (a+b) | Outer capsid protein sigma 3 | Outer capsid protein sigma 3 | Outer capsid protein sigma 3 | Outer capsid protein sigma 3 | (Reovirus sp. ) [TaxId: 10891 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Outer capsid protein sigma 3 | 8020736 | 4003686 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Outer capsid protein sigma 3 | 8033116 | 3001282 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Outer capsid protein sigma 3 | 8033116 | 3001282 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Reovirus_cap | e1fn9A1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: Reovirus_cap | ECOD (1.6) |
B | Reovirus_cap | e1fn9B1 | A: a+b complex topology | X: Outer capsid protein sigma 3-related (From Topology) | H: Outer capsid protein sigma 3-related (From Topology) | T: Outer capsid protein sigma 3-related | F: Reovirus_cap | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1630.10 | Alpha Beta | Alpha-Beta Complex | Outer-capsid protein sigma 3, small lobe | Outer-capsid protein sigma 3, small lobe | CATH (4.3.0) |
A | 3.90.1320.10 | Alpha Beta | Alpha-Beta Complex | Outer-capsid protein sigma 3, large lobe | Outer-capsid protein sigma 3, large lobe | CATH (4.3.0) |
B | 3.90.1630.10 | Alpha Beta | Alpha-Beta Complex | Outer-capsid protein sigma 3, small lobe | Outer-capsid protein sigma 3, small lobe | CATH (4.3.0) |
B | 3.90.1320.10 | Alpha Beta | Alpha-Beta Complex | Outer-capsid protein sigma 3, large lobe | Outer-capsid protein sigma 3, large lobe | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00979 | Reovirus outer capsid protein, Sigma 3 (Reovirus_cap) | Reovirus outer capsid protein, Sigma 3 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000153 | Reovirus, outer capsid sigma 3 | Family | |
IPR023634 | Reovirus, outer capsid sigma-3 domain superfamily | Homologous Superfamily |