1F15
CUCUMBER MOSAIC VIRUS (STRAIN FNY)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1f15a_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Positive stranded ssRNA viruses | Bromoviridae-like VP | Cucumovirus coat protein | (Cucumber mosaic virus (strain FNY) ) [TaxId: 12307 ], | SCOPe (2.08) |
| B | d1f15b_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Positive stranded ssRNA viruses | Bromoviridae-like VP | Cucumovirus coat protein | (Cucumber mosaic virus (strain FNY) ) [TaxId: 12307 ], | SCOPe (2.08) |
| C | d1f15c_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | Positive stranded ssRNA viruses | Bromoviridae-like VP | Cucumovirus coat protein | (Cucumber mosaic virus (strain FNY) ) [TaxId: 12307 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Bromoviridae-like VP | 8028435 | 4003474 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Positive stranded ssRNA viruses-like | 8040814 | 3000918 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8040814 | 3000918 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8040814 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Cucumo_coat | e1f15A1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Cucumo_coat | ECOD (1.6) |
| B | Cucumo_coat | e1f15B1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Cucumo_coat | ECOD (1.6) |
| C | Cucumo_coat | e1f15C1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Cucumo_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.530 | Mainly Beta | Sandwich | Jelly Rolls | Cucumovirus coat protein, subunit A | CATH (4.3.0) |
| B | 2.60.120.530 | Mainly Beta | Sandwich | Jelly Rolls | Cucumovirus coat protein, subunit A | CATH (4.3.0) |
| C | 2.60.120.530 | Mainly Beta | Sandwich | Jelly Rolls | Cucumovirus coat protein, subunit A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00760 | Cucumovirus coat protein (Cucumo_coat) | Cucumovirus coat protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| COAT PROTEIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR037137 | Cucumovirus coat protein, subunit A superfamily | Homologous Superfamily | |
| IPR000247 | Cucumovirus coat protein | Family |
