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 1DLC | pdb_00001dlc

CRYSTAL STRUCTURE OF INSECTICIDAL DELTA-ENDOTOXIN FROM BACILLUS THURINGIENSIS AT 2.5 ANGSTROMS RESOLUTION

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1dlca1 All beta proteins Galactose-binding domain-like Galactose-binding domain-like delta-Endotoxin, C-terminal domain delta-Endotoxin, C-terminal domain (Bacillus thuringiensis ) [TaxId: 1428 ], SCOPe (2.08)
Ad1dlca2 All beta proteins beta-Prism I delta-Endotoxin (insectocide), middle domain delta-Endotoxin (insectocide), middle domain delta-Endotoxin (insectocide), middle domain (Bacillus thuringiensis ) [TaxId: 1428 ], SCOPe (2.08)
Ad1dlca3 Membrane and cell surface proteins and peptides Toxins' membrane translocation domains delta-Endotoxin (insectocide), N-terminal domain delta-Endotoxin (insectocide), N-terminal domain delta-Endotoxin (insectocide), N-terminal domain (Bacillus thuringiensis ) [TaxId: 1428 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familydelta-Endotoxin (insectocide), N-terminal domain 8025270 4002974 SCOP2 (2022-06-29)
ASCOP2 Familydelta-endotoxin, c-terminal domain 8028759 4002480 SCOP2 (2022-06-29)
ASCOP2 Familydelta-Endotoxin (insectocide), middle domain 8030639 4002768 SCOP2 (2022-06-29)
ASCOP2 Superfamilydelta-Endotoxin (insectocide), N-terminal domain 8037649 3001965 SCOP2 (2022-06-29)
ASCOP2 Superfamilygalactose-binding domain-like 8041138 3000087 SCOP2 (2022-06-29)
ASCOP2 Superfamilydelta-Endotoxin (insectocide), middle domain 8043018 3001725 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AEndotoxin_Me1dlcA2 A: beta duplicates or obligate multimersX: beta-Prism IH: beta-Prism IT: beta-Prism IF: Endotoxin_MECOD (v295.2)
AEndotoxin_Ne1dlcA3 A: alpha arraysX: Toxins' membrane translocation domainsH: delta-Endotoxin (insectocide), N-terminal domainT: delta-Endotoxin (insectocide), N-terminal domainF: Endotoxin_NECOD (v295.2)
ARhve1dlcA1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: RhvECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.190.10 Mainly Alpha Up-down Bundle Delta-Endotoxin domain 1CATH (4.3.0)
A2.60.120.260 Mainly Beta Sandwich Jelly Rolls Galactose-binding domain-likeCATH (4.3.0)
A2.100.10.10 Mainly Beta Aligned Prism Vitelline Membrane Outer Layer Protein I, subunit A Pesticidal crystal protein, central domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DELTA-ENDOTOXIN CRYIIIA -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001178Pesticidal crystal protein, domain IIDomain
IPR036399Pesticidal crystal protein, central domain superfamilyHomologous Superfamily
IPR005638Pesticidal crystal protein, domain IIIDomain
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
IPR038979Pesticidal crystal proteinFamily
IPR036716Pesticidal crystal protein, N-terminal domain superfamilyHomologous Superfamily
IPR005639Pesticidal crystal protein, domain IDomain