1DJ1 | pdb_00001dj1

CRYSTAL STRUCTURE OF R48A MUTANT OF CYTOCHROME C PEROXIDASE

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Structure Motif: Primary M-CSA Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1dj1a_	All alpha proteins	Heme-dependent peroxidases	Heme-dependent peroxidases	CCP-like	Cytochrome c peroxidase, CCP	baker's yeast (Saccharomyces cerevisiae ) [TaxId: 4932 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Heme-dependent peroxidases	8035554	3000844	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ion_trans_2	e1dj1A1	A: alpha arrays	X: Urease, gamma-subunit	H: Urease, gamma-subunit	T: Urease, gamma-subunit	F: Ion_trans_2	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.520.10	Mainly Alpha	Orthogonal Bundle	Peroxidase	domain 1	CATH (4.3.0)
A	1.10.420.10	Mainly Alpha	Orthogonal Bundle	Peroxidase	domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00141	Peroxidase (peroxidase)	Peroxidase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	CYTOCHROME C PEROXIDASE	peroxidase activity oxidoreductase activity cytochrome-c peroxidase activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor catalytic activity binding tetrapyrrole binding heme binding	cellular response to stimulus response to oxidative stress cellular response to chemical stimulus response to stimulus cellular response to stress response to stress response to chemical cellular response to oxidative stress cellular process cellular response to chemical stress	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen mitochondrial intermembrane space organelle envelope lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen mitochondrial intermembrane space organelle envelope lumen organelle envelope mitochondrial envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR010255	Haem peroxidase superfamily	Homologous Superfamily
A	IPR002207	Class I peroxidase	Family
A	IPR044831	Heme-binding peroxidase Ccp1-like	Family
A	IPR002016	Haem peroxidase	Domain
A	IPR019794	Peroxidase, active site	Active Site
A	IPR019793	Peroxidases heam-ligand binding site	Binding Site

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

Chains	Enzyme Name	Description	Catalytic Residues
A	cytochrome-c peroxidase (mono-heme type) M-CSA #709	Cytochrome c peroxidase (CcP) is a heme-dependent yeast mitochondrial oxidoreductase enzyme that catalyses the the reduction of hydrogen peroxide to water, using reducing equivalents ferrocytochrome c. The catalytic mechanism couples the one-electron oxidation of ferrocytochrome c to the two-electron reduction of hydrogen peroxide to water.	Defined by 3 residues: ALA:A-45 [auth A-48]HIS:A-49 [auth A-52]TRP:A-188 [auth A-191] \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif EC: 1.11.1.5 (PDB Primary Data) Search M-CSA Motif + EC 1.11.1.5