NMR SOLUTION STRUCTURE OF THE CAPSID PROTEIN FROM ROUS SARCOMA VIRUS
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A | SCOP2 Family | Retrovirus capsid protein C-terminal domain | 8024806 | 4000865 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Retrovirus capsid dimerization domain-like | 8037185 | 3001819 | SCOP2 (2021-05-27) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A | PF19317 | e1d1dA1 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein-C (From Topology) | T: Retrovirus capsid protein-C | F: PF19317 | ECOD (1.6) |
A | PF00607 | e1d1dA2 | A: alpha bundles | X: Retrovirus capsid protein | H: Retrovirus capsid protein N-terminal domain (From Topology) | T: Retrovirus capsid protein N-terminal domain | F: PF00607 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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| PROTEIN (CAPSID PROTEIN) | | | |
Chains | Accession | Name | Type |
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| IPR004028 | Retroviral Gag polyprotein, M | Domain |
| IPR036875 | Zinc finger, CCHC-type superfamily | Homologous Superfamily |
| IPR001995 | Peptidase A2A, retrovirus, catalytic | Domain |
| IPR034170 | Retropepsin-like catalytic domain | Domain |
| IPR001878 | Zinc finger, CCHC-type | Domain |
| IPR008919 | Retrovirus capsid, N-terminal | Homologous Superfamily |
| IPR010999 | Retroviral matrix protein | Homologous Superfamily |
| IPR012344 | Matrix protein, lentiviral and alpha-retroviral, N-terminal | Homologous Superfamily |
| IPR021109 | Aspartic peptidase domain superfamily | Homologous Superfamily |
| IPR001969 | Aspartic peptidase, active site | Active Site |
| IPR018061 | Retropepsins | Domain |
| IPR008916 | Retrovirus capsid, C-terminal | Homologous Superfamily |