STRUCTURE OF THE COENZYME B12 DEPENDENT ENZYME GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d1ccwd_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Cobalamin (vitamin B12)-dependent enzymes | Glutamate mutase, large subunit | Glutamate mutase, large subunit | (Clostridium cochlearium ) [TaxId: 1494 ], | SCOPe (2.08) |
| B | d1ccwb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Cobalamin (vitamin B12)-dependent enzymes | Glutamate mutase, large subunit | Glutamate mutase, large subunit | (Clostridium cochlearium ) [TaxId: 1494 ], | SCOPe (2.08) |
| C | d1ccwc_ | Alpha and beta proteins (a/b) | Flavodoxin-like | Cobalamin (vitamin B12)-binding domain | Cobalamin (vitamin B12)-binding domain | Glutamate mutase, small subunit | (Clostridium cochlearium ) [TaxId: 1494 ], | SCOPe (2.08) |
| A | d1ccwa_ | Alpha and beta proteins (a/b) | Flavodoxin-like | Cobalamin (vitamin B12)-binding domain | Cobalamin (vitamin B12)-binding domain | Glutamate mutase, small subunit | (Clostridium cochlearium ) [TaxId: 1494 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Cobalamin (vitamin B12)-dependent enzymes | 8043856 | 3000609 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Glutamate mutase, large subunit | 8031478 | 4003333 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Cobalamin (vitamin B12)-dependent enzymes | 8043856 | 3000609 | SCOP2 (2022-06-29) |
| C | SCOP2B Superfamily | Cobalamin (vitamin B12)-binding domain | 8044100 | 3001260 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Cobalamin (vitamin B12)-binding domain | 8044100 | 3001260 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Enolase_C | e1ccwD1 | A: beta barrels | X: HTH | H: HTH | T: winged helix domain | F: Enolase_C | ECOD (v294.2) |
| B | Met_asp_mut_E | e1ccwB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: Met_asp_mut_E | ECOD (v294.2) |
| C | B12-binding | e1ccwC1 | A: beta barrels | X: HTH | H: HTH | T: winged helix domain | F: B12-binding | ECOD (v294.2) |
| A | B12-binding | e1ccwA1 | A: beta barrels | X: Flavodoxin-like | H: Rossmann-related | T: CheY-like | F: B12-binding | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 3.20.20.240 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Methylmalonyl-CoA mutase | CATH (4.3.0) |
| D | 3.90.970.10 | Alpha Beta | Alpha-Beta Complex | Glutamate mutase, C-terminal domain | CATH (4.3.0) | |
| B | 3.20.20.240 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Methylmalonyl-CoA mutase | CATH (4.3.0) |
| B | 3.90.970.10 | Alpha Beta | Alpha-Beta Complex | Glutamate mutase, C-terminal domain | CATH (4.3.0) | |
| C | 3.40.50.280 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Cobalamin-binding domain | CATH (4.3.0) |
| A | 3.40.50.280 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Cobalamin-binding domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| PROTEIN (GLUTAMATE MUTASE) | - | - | ||
| PROTEIN (GLUTAMATE MUTASE) | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR014714 | Glutamate mutase E subunit, C-terminal domain superfamily | Homologous Superfamily | |
| IPR016176 | Cobalamin (vitamin B12)-dependent enzyme, catalytic | Homologous Superfamily | |
| IPR006396 | Glutamate mutase epsilon subunit | Family | |
| IPR036724 | Cobalamin-binding domain superfamily | Homologous Superfamily | |
| IPR006158 | Cobalamin (vitamin B12)-binding domain | Domain | |
| IPR006394 | Glutamate mutase sigma subunit | Family |














