| D [auth L8] | IPR023672 | Large ribosomal subunit protein uL2, archaea/eukaryota | Family |
| D [auth L8] | IPR022669 | Large ribosomal subunit protein uL2, C-terminal | Domain |
| D [auth L8] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| D [auth L8] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| D [auth L8] | IPR022671 | Large ribosomal subunit protein uL2, conserved site | Conserved Site |
| D [auth L8] | IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |
| D [auth L8] | IPR022666 | Large ribosomal subunit protein uL2, RNA-binding domain | Domain |
| D [auth L8] | IPR014726 | Large ribosomal subunit protein uL2, domain 3 | Homologous Superfamily |
| D [auth L8] | IPR002171 | Large ribosomal subunit protein uL2 | Family |
| E [auth L3] | IPR019926 | Large ribosomal subunit protein uL3, conserved site | Conserved Site |
| E [auth L3] | IPR009000 | Translation protein, beta-barrel domain superfamily | Homologous Superfamily |
| E [auth L3] | IPR044892 | Ribosomal protein L3, domain 3, archaeal-type superfamily | Homologous Superfamily |
| E [auth L3] | IPR000597 | Large ribosomal subunit protein uL3 | Family |
| E [auth L3] | IPR045077 | Large ribosomal subunit protein uL3, archaea/eukaryota | Family |
| I [auth L7] | IPR036919 | Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily | Homologous Superfamily |
| I [auth L7] | IPR005998 | Large ribosomal subunit protein uL30, eukaryota | Family |
| I [auth L7] | IPR039699 | Large ribosomal subunit protein uL30 | Family |
| I [auth L7] | IPR035808 | Large ribosomal subunit protein uL30, eukaryota/archaea | Domain |
| I [auth L7] | IPR012988 | Large ribosomal subunit protein uL30, N-terminal, eukaryota | Domain |
| I [auth L7] | IPR016082 | Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain | Domain |
| I [auth L7] | IPR018038 | Large ribosomal subunit protein uL30, conserved site | Conserved Site |
| Q [auth bb] | IPR023563 | Large ribosomal subunit protein uL13, conserved site | Conserved Site |
| Q [auth bb] | IPR005822 | Large ribosomal subunit protein uL13 | Family |
| Q [auth bb] | IPR036899 | Large ribosomal subunit protein uL13 superfamily | Homologous Superfamily |
| Q [auth bb] | IPR005755 | Large ribosomal subunit protein uL13, eukaryota/archaea | Family |
| W [auth 24] | IPR011017 | TRASH domain | Domain |
| W [auth 24] | IPR056366 | Large ribosomal subunit protein eL24 | Family |
| W [auth 24] | IPR000988 | Large ribosomal subunit protein eL24-related, N-terminal | Domain |
| W [auth 24] | IPR023442 | Large ribosomal subunit protein eL24, conserved site | Conserved Site |
| W [auth 24] | IPR038630 | Ribosomal protein L24e/L24 superfamily | Homologous Superfamily |
| Z [auth 27] | IPR018262 | Large ribosomal subunit protein eL27, conserved site | Conserved Site |
| Z [auth 27] | IPR038655 | Large ribosomal subunit protein eL27 superfamily | Homologous Superfamily |
| Z [auth 27] | IPR005824 | KOW | Domain |
| Z [auth 27] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| Z [auth 27] | IPR001141 | Large ribosomal subunit protein eL27 | Family |
| Z [auth 27] | IPR041991 | Large ribosomal subunit protein eL27, KOW domain | Domain |
| AA [auth dd] | IPR027386 | Ribosomal uL15, N-terminal | Homologous Superfamily |
| AA [auth dd] | IPR021131 | Large ribosomal subunit protein uL15/eL18 | Domain |
| AA [auth dd] | IPR030878 | Large ribosomal subunit protein uL15 | Family |
| AA [auth dd] | IPR001196 | Large ribosomal subunit protein uL15, conserved site | Conserved Site |
| AA [auth dd] | IPR036227 | Large ribosomal subunit protein uL15/eL18 superfamily | Homologous Superfamily |
| CA [auth 30] | IPR022991 | Large ribosomal subunit protein eL30, conserved site | Conserved Site |
| CA [auth 30] | IPR004038 | Ribosomal protein eL8/eL30/eS12/Gadd45 | Domain |
| CA [auth 30] | IPR000231 | Large ribosomal subunit protein eL30 | Family |
| CA [auth 30] | IPR039109 | Large ribosomal subunit protein eL30-like | Family |
| CA [auth 30] | IPR029064 | Ribosomal protein eL30-like superfamily | Homologous Superfamily |
| LA [auth 39] | IPR023626 | Large ribosomal subunit protein eL39 domain superfamily | Homologous Superfamily |
| LA [auth 39] | IPR000077 | Large ribosomal subunit protein eL39 | Family |
| LA [auth 39] | IPR020083 | Large ribosomal subunit protein eL39, conserved site | Conserved Site |
| PA [auth gg] | IPR029004 | Ribosomal eL28/Mak16 | Domain |
| PA [auth gg] | IPR002672 | Large ribosomal subunit protein eL28 | Family |
| RA [auth t] | IPR020785 | Large ribosomal subunit protein uL11, conserved site | Conserved Site |
| RA [auth t] | IPR020783 | Large ribosomal subunit protein uL11, C-terminal | Domain |
| RA [auth t] | IPR000911 | Ribosomal protein uL11 | Family |
| RA [auth t] | IPR036769 | Large ribosomal subunit protein uL11, C-terminal domain superfamily | Homologous Superfamily |
| RA [auth t] | IPR020784 | Large ribosomal subunit protein uL11, N-terminal | Domain |
| RA [auth t] | IPR036796 | Large ribosomal subunit protein uL11, N-terminal domain superfamily | Homologous Superfamily |
| H [auth L6] | IPR005568 | Large ribosomal subunit protein uL6, N-terminal | Domain |
| H [auth L6] | IPR049633 | Large ribosomal subunit protein eL6, conserved site | Conserved Site |
| H [auth L6] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| H [auth L6] | IPR041997 | Large ribosomal subunit protein eL6, KOW domain | Domain |
| H [auth L6] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| H [auth L6] | IPR000915 | Large ribosomal subunit protein eL6 | Family |
| G [auth L5] | IPR057268 | Large ribosomal subunit protein uL18 | Family |
| G [auth L5] | IPR005485 | Large ribosomal subunit protein uL18, eukaryota/archaea | Family |
| G [auth L5] | IPR025607 | Large ribosomal subunit protein uL18, C-terminal, eukaryotes | Domain |
| F [auth L4] | IPR025755 | Large ribosomal subunit protein uL4, C-terminal domain | Domain |
| F [auth L4] | IPR002136 | Large ribosomal subunit protein uL4 | Family |
| F [auth L4] | IPR013000 | Large ribosomal subunit protein uL4, eukaryota/archaea, conserved site | Conserved Site |
| F [auth L4] | IPR045240 | Large ribosomal subunit protein uL4, eukaryota/archaea | Family |
| F [auth L4] | IPR023574 | Large ribosomal subunit protein uL4 domain superfamily | Homologous Superfamily |
| XA [auth 25] | IPR036853 | Large ribosomal subunit protein uL14 superfamily | Homologous Superfamily |
| XA [auth 25] | IPR000218 | Large ribosomal subunit protein uL14 | Family |
| XA [auth 25] | IPR019972 | Large ribosomal subunit protein uL14, conserved site | Conserved Site |
| TA [auth u] | IPR050257 | Large ribosomal subunit protein eL8/uL1-like | Family |
| TA [auth u] | IPR023673 | Large ribosomal subunit protein uL1, conserved site | Conserved Site |
| TA [auth u] | IPR016095 | Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain | Homologous Superfamily |
| TA [auth u] | IPR023674 | Ribosomal protein uL1-like | Homologous Superfamily |
| TA [auth u] | IPR002143 | Large ribosomal subunit protein uL1 | Family |
| TA [auth u] | IPR028364 | Ribosomal protein uL1/ribosomal biogenesis protein | Family |
| SA [auth EB] | IPR047113 | Proliferation-associated protein 2G4/ARX1 | Family |
| SA [auth EB] | IPR018349 | Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site | Binding Site |
| SA [auth EB] | IPR036005 | Creatinase/aminopeptidase-like | Homologous Superfamily |
| SA [auth EB] | IPR000994 | Peptidase M24 | Domain |
| SA [auth EB] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| SA [auth EB] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
| SA [auth EB] | IPR004545 | PA2G4 family | Family |
| QA [auth s] | IPR043141 | Large ribosomal subunit protein uL10-like domain superfamily | Homologous Superfamily |
| QA [auth s] | IPR043164 | Large ribosomal subunit protein uL10-like, insertion domain superfamily | Homologous Superfamily |
| QA [auth s] | IPR030670 | Large ribosomal subunit protein uL10, eukaryota | Family |
| QA [auth s] | IPR001790 | Large ribosomal subunit protein uL10, N-terminal | Domain |
| QA [auth s] | IPR050323 | Universal ribosomal protein uL10 | Family |
| QA [auth s] | IPR040637 | Large ribosomal subunit protein uL10-like, insertion domain | Domain |
| OA [auth ff] | IPR002674 | Large ribosomal subunit protein eL43 | Family |
| OA [auth ff] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| OA [auth ff] | IPR011331 | Large ribosomal subunit protein eL37/eL43 | Homologous Superfamily |
| NA [auth 42] | IPR053708 | Eukaryotic Ribosomal Large Subunit eL42 | Homologous Superfamily |
| NA [auth 42] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| NA [auth 42] | IPR000552 | Large ribosomal subunit protein eL42 | Family |
| MA [auth 40] | IPR019956 | Ubiquitin domain | Domain |
| MA [auth 40] | IPR019954 | Ubiquitin conserved site | Conserved Site |
| MA [auth 40] | IPR050158 | Ubiquitin and ubiquitin-like | Family |
| MA [auth 40] | IPR001975 | Large ribosomal subunit protein eL40 domain | Domain |
| MA [auth 40] | IPR038587 | Large ribosomal subunit protein eL40 superfamily | Homologous Superfamily |
| MA [auth 40] | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
| MA [auth 40] | IPR000626 | Ubiquitin-like domain | Domain |
| JA [auth 37] | IPR011331 | Large ribosomal subunit protein eL37/eL43 | Homologous Superfamily |
| JA [auth 37] | IPR001569 | Large ribosomal subunit protein eL37 | Family |
| JA [auth 37] | IPR018267 | Large ribosomal subunit protein eL37, conserved site | Conserved Site |
| JA [auth 37] | IPR011332 | Zinc-binding ribosomal protein | Homologous Superfamily |
| IA [auth 36] | IPR000509 | Large ribosomal subunit protein eL36 | Family |
| IA [auth 36] | IPR038097 | Large ribosomal subunit protein eL36 domain superfamily | Homologous Superfamily |
| HA [auth 35] | IPR001854 | Large ribosomal subunit protein uL29 | Family |
| HA [auth 35] | IPR036049 | Large ribosomal subunit protein uL29 superfamily | Homologous Superfamily |
| HA [auth 35] | IPR018254 | Large ribosomal subunit protein uL29, conserved site | Conserved Site |
| HA [auth 35] | IPR045059 | Large ribosomal subunit protein uL29, eukaryota | Family |
| GA [auth 34] | IPR008195 | Large ribosomal subunit protein eL34 | Family |
| GA [auth 34] | IPR038562 | Large ribosomal subunit protein eL34, C-terminal domain superfamily | Homologous Superfamily |
| GA [auth 34] | IPR018065 | Large ribosomal subunit protein eL34, conserved site | Conserved Site |
| FA [auth ee] | IPR038661 | Large ribosomal subunit protein eL33 superfamily | Homologous Superfamily |
| FA [auth ee] | IPR009000 | Translation protein, beta-barrel domain superfamily | Homologous Superfamily |
| FA [auth ee] | IPR001780 | Large ribosomal subunit protein eL33 | Family |
| FA [auth ee] | IPR018266 | Large ribosomal subunit protein eL33, conserved site | Conserved Site |
| DA [auth 31] | IPR020052 | Large ribosomal subunit protein eL31, conserved site | Conserved Site |
| DA [auth 31] | IPR023621 | Large ribosomal subunit protein eL31 domain superfamily | Homologous Superfamily |
| DA [auth 31] | IPR000054 | Large ribosomal subunit protein eL31 | Family |
| BA [auth 29] | IPR002673 | Large ribosomal subunit protein eL29 | Family |
| Y [auth 26] | IPR005756 | Large ribosomal subunit protein uL24, eukaryota_archaea | Family |
| Y [auth 26] | IPR041988 | Large ribosomal subunit protein uL24, KOW domain | Domain |
| Y [auth 26] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| Y [auth 26] | IPR005824 | KOW | Domain |
| Y [auth 26] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| Y [auth 26] | IPR005825 | Large ribosomal subunit protein uL24, conserved site | Conserved Site |
| X [auth cc] | IPR012678 | Ribosomal protein uL23/eL15/eS24 core domain superfamily | Homologous Superfamily |
| X [auth cc] | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
| X [auth cc] | IPR005633 | Large ribosomal subunit protein uL23, N-terminal | Domain |
| X [auth cc] | IPR019985 | Large ribosomal subunit protein uL23 | Family |
| X [auth cc] | IPR001014 | Large ribosomal subunit protein uL23, conserved site | Conserved Site |
| X [auth cc] | IPR013025 | Large ribosomal subunit protein uL23-like | Family |
| U [auth 21] | IPR018259 | Large ribosomal subunit protein eL21, conserved site | Conserved Site |
| U [auth 21] | IPR036948 | Large ribosomal subunit protein eL21 superfamily | Homologous Superfamily |
| U [auth 21] | IPR001147 | Large ribosomal subunit protein eL21 | Family |
| U [auth 21] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| R [auth 17] | IPR018260 | Large ribosomal subunit protein uL22, conserved site | Conserved Site |
| R [auth 17] | IPR005721 | Large ribosomal subunit protein uL22, eukaryota/archaea | Family |
| R [auth 17] | IPR036394 | Ribosomal protein uL22 superfamily | Homologous Superfamily |
| R [auth 17] | IPR001063 | Large ribosomal subunit protein uL22 | Family |
| R [auth 17] | IPR057265 | Large ribosomal subunit protein uL22, archaea | Family |
| P [auth 15] | IPR012678 | Ribosomal protein uL23/eL15/eS24 core domain superfamily | Homologous Superfamily |
| P [auth 15] | IPR020925 | Large ribosomal subunit protein eL15, conserved site | Conserved Site |
| P [auth 15] | IPR024794 | Large ribosomal subunit protein eL15 core domain superfamily | Homologous Superfamily |
| P [auth 15] | IPR000439 | Large ribosomal subunit protein eL15 | Family |
| O [auth 14] | IPR039660 | Large ribosomal subunit protein eL14 | Family |
| O [auth 14] | IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily |
| O [auth 14] | IPR002784 | Large ribosomal subunit protein eL14 domain | Domain |
| O [auth 14] | IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily |
| M [auth 11] | IPR020929 | Large ribosomal subunit protein uL5, conserved site | Conserved Site |
| M [auth 11] | IPR022803 | Large ribosomal subunit protein uL5 domain superfamily | Homologous Superfamily |
| M [auth 11] | IPR031309 | Large ribosomal subunit protein uL5, C-terminal | Domain |
| M [auth 11] | IPR057266 | Large ribosomal subunit protein uL5, eukaryota/archaea | Family |
| M [auth 11] | IPR031310 | Large ribosomal subunit protein uL5, N-terminal | Domain |
| M [auth 11] | IPR002132 | Large ribosomal subunit protein uL5 | Family |
| L [auth 10] | IPR001197 | Large ribosomal subunit protein uL16, eukaryota/archaea | Family |
| L [auth 10] | IPR036920 | Large ribosomal subunit protein uL16 superfamily | Homologous Superfamily |
| L [auth 10] | IPR018255 | Large ribosomal subunit protein uL16, conserved site, eukaryota/archaea | Conserved Site |
| L [auth 10] | IPR016180 | Large ribosomal subunit protein uL16 domain | Domain |
| L [auth 10] | IPR047873 | Large ribosomal subunit protein uL16 | Family |
| K [auth L9] | IPR020040 | Large ribosomal subunit protein uL6, alpha-beta domain | Domain |
| K [auth L9] | IPR002359 | Large ribosomal subunit protein uL6, conserved site-2 | Conserved Site |
| K [auth L9] | IPR036789 | Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily | Homologous Superfamily |
| K [auth L9] | IPR000702 | Large ribosomal subunit protein uL6-like | Family |