9FCR

Crystal structure of RBBP9 with spacegroup p212121

PDB DOI: https://doi.org/10.2210/pdb9FCR/pdb

Classification: CELL CYCLE
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2024-05-15 Released: 2024-09-11
Deposition Author(s): Gorrec, F., Bellini, D.
Funding Organization(s): Medical Research Council (MRC, United Kingdom)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.37 Å
R-Value Free: 0.234
R-Value Work: 0.202
R-Value Observed: 0.203

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of RBBP9 with spacegroup p212121

Gorrec, F., Bellini, D.

To be published.

Macromolecule Content

Total Structure Weight: 42.05 kDa
Atom Count: 3,307
Modelled Residue Count: 366
Deposited Residue Count: 372
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Serine hydrolase RBBP9	A, B	186	Homo sapiens	Mutation(s): 0 Gene Names: RBBP9, BOG, RBBP10 EC: 3
UniProt & NIH Common Fund Data Resources
Find proteins for O75884 (Homo sapiens) Explore O75884 Go to UniProtKB: O75884
PHAROS: O75884 GTEx: ENSG00000089050
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O75884
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.37 Å
R-Value Free: 0.234
R-Value Work: 0.202
R-Value Observed: 0.203
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 67.74	α = 90
b = 82.55	β = 90
c = 58.74	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PHENIX	refinement
DIALS	data reduction
DIALS	data scaling
MOLREP	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-09-11

Deposition Author(s):

Funding Organization	Location	Grant Number
Medical Research Council (MRC, United Kingdom)	United Kingdom	--

Revision History (Full details and data files)

Version 1.0: 2024-09-11
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.