Virological characteristics of the SARS-CoV-2 Omicron EG.5.1 variant
Nomai, T., Anraku, Y., Kita, S., Hashiguchi, T., Maenaka, K.(2024) Biorxiv 
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2024) Biorxiv 
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Spike glycoprotein | 1,245 | Severe acute respiratory syndrome coronavirus 2 | Mutation(s): 49  Gene Names: S | ||
UniProt | |||||
Find proteins for P0DTC2 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTC2  Go to UniProtKB:  P0DTC2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0DTC2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | B [auth A] C [auth A] D [auth A] E [auth A] F [auth A] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | PHENIX | 1.20.1_4487: |
RECONSTRUCTION | cryoSPARC | 4.3.1 |
Funding Organization | Location | Grant Number |
---|---|---|
Japan Agency for Medical Research and Development (AMED) | Japan | JP21am0101093 |
Japan Agency for Medical Research and Development (AMED) | Japan | JP22ama121037 |
Japan Science and Technology | Japan | JPMJCR20H8 |
Japan Society for the Promotion of Science (JSPS) | Japan | JPJSCCA20190008 |
Japan Society for the Promotion of Science (JSPS) | Japan | 20H05773 |
Japan Society for the Promotion of Science (JSPS) | Japan | JP20H05873 |