2ME6

NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG

• PDB DOI: https://doi.org/10.2210/pdb2ME6/pdb
• NAKB: 2ME6

• Classification: TRANSCRIPTION/DNA
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2013-09-23 Released: 2013-10-30 
• Deposition Author(s): Proudfoot, A., Serrano, P., Geralt, M., Wuthrich, K., Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 4 
• Selection Criteria: structures with the least restraint violations 

Literature

NMR Structure of the homeodomain transcription factor Gbx1 from Homo sapiens in complex with the DNA sequence CGACTAATTAGTCG

Proudfoot, A., Wuthrich, K., Serrano, P., Geralt, M.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 16.91 kDa 
• Atom Count: 1,159 
• Modelled Residue Count: 99 
• Deposited Residue Count: 99 
• Unique protein chains: 1
• Unique nucleic acid chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Homeobox protein GBX-1	A	71	Homo sapiens	Mutation(s): 0  Gene Names: GBX1
UniProt & NIH Common Fund Data Resources
Find proteins for Q14549 (Homo sapiens) Explore Q14549  Go to UniProtKB:  Q14549
PHAROS:  Q14549 GTEx:  ENSG00000164900

Entity ID: 2
Molecule	Chains	Length	Organism	Image
DNA (5'-D(*CP*GP*AP*CP*TP*AP*AP*TP*TP*AP*GP*TP*CP*G)-3')	B, C	14	N/A

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 4 
• Selection Criteria: structures with the least restraint violations 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2013-10-30 
Deposition Author(s): Proudfoot, A., Serrano, P., Geralt, M., Wuthrich, K., Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)

Revision History  

• Version 1.0: 2013-10-30
  Type: Initial release
  
• Version 1.1: 2024-05-01
  Changes: Data collection, Database references