X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.22730.2M MgCl2, 0.1M HEPES, 20%w/v PEG2000, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 273K
Crystal Properties
Matthews coefficientSolvent content
2.8456.62

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.87α = 90
b = 89.66β = 90
c = 100.12γ = 90
Symmetry
Space GroupI 2 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDAPEX II CCD2011-03-03MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SEALED TUBEOTHER1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.655.030.05413.939464

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.655.0337306196799.520.178510.175990.22578RANDOM13.836
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.030.05-0.08
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.827
r_dihedral_angle_4_deg18.911
r_dihedral_angle_3_deg13.342
r_sphericity_free11.015
r_dihedral_angle_1_deg6.185
r_scangle_it5.444
r_sphericity_bonded4.543
r_scbond_it3.984
r_mcangle_it2.815
r_rigid_bond_restr2.067
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.827
r_dihedral_angle_4_deg18.911
r_dihedral_angle_3_deg13.342
r_sphericity_free11.015
r_dihedral_angle_1_deg6.185
r_scangle_it5.444
r_sphericity_bonded4.543
r_scbond_it3.984
r_mcangle_it2.815
r_rigid_bond_restr2.067
r_mcbond_it1.966
r_angle_refined_deg1.886
r_angle_other_deg1.002
r_mcbond_other0.859
r_chiral_restr0.112
r_bond_refined_d0.023
r_gen_planes_refined0.009
r_bond_other_d0.002
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1640
Nucleic Acid Atoms
Solvent Atoms197
Heterogen Atoms16

Software

Software
Software NamePurpose
PROTEUM2data collection
PHASERphasing
REFMACrefinement
PROTEUM2data reduction
PROTEUM2data scaling