2Z19

Phase transition of monoclinic lysozyme crystal soaked in a saturated NaCl solution


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1Dehydration-induced phase transition7.6293NaCl, nitrogen-gas, pH 7.6, Dehydration-induced phase transition, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
1.5420.35

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 26.085α = 90
b = 59.055β = 110.63
c = 30.703γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray90CCDBRUKER SMART 6000Montel optics2006-12-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEMACSCIENCE1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.155093.20.0884.233183929674
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.151.1972.60.2112.713167

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB Entry 2D4J1.15252954714770.1780.203Random10.3
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
s_non_zero_chiral_vol0.061
s_zero_chiral_vol0.055
s_from_restr_planes0.029
s_angle_d0.027
s_bond_d0.009
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1028
Nucleic Acid Atoms
Solvent Atoms152
Heterogen Atoms6

Software

Software
Software NamePurpose
SHELXL-97model building
SHELXL-97refinement
SAINTdata reduction
SAINTdata scaling
SHELXL-97phasing