2ORL
Solution structure of the cytochrome c- para-aminophenol adduct
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | 2-3mM Cytochrome c U-15N, 50mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 mM phosphate buffer | 7.0 | 1 atm | 303 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| combined docking and simulated annealing with NMR restraints | four intermolecular NOEs were used together with intra-protein NOEs and angle constraints | TopSpin |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structure with the lowest interaction energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 25 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | TopSpin | 1.x | |
| 2 | data analysis | CARA | ||
| 3 | structure solution | AutoDock | ||
| 4 | refinement | XPLOR-NIH | ||
