2JQR

Solution model of crosslinked complex of cytochrome c and adrenodoxin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.4 mM [U-98% 15N] CcV28C, 0.2-0.6 mM AdxL80C, 20 mM potassium phosphate95% H2O/5% D2O7.4ambient285
22D 1H-15N HSQC0.4 mM [U-98% 15N] AdxL80C, 0.2-0.6 mM CcV28C, 20 mM potassium phosphate95% H2O/5% D2O7.4ambient285
32D 1H-15N HSQC1.0 mM [U-98% 15N] CcV28C, 5 mM DTT, 20 mM potassium phosphate95% H2O/5% D2O7.4ambient285
42D 1H-15N HSQC0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate95% H2O/5% D2O7.4ambient285
53D 1H-15N NOESY0.4 mM [U-98% 15N] CcV28C, 0.2-0.6 mM AdxL80C, 20 mM potassium phosphate95% H2O/5% D2O0.47.4ambient301
63D 1H-15N NOESY0.4 mM [U-98% 15N] AdxL80C, 0.2-0.6 mM CcV28C, 20 mM potassium phosphate95% H2O/5% D2O0.47.4ambient301
73D 1H-15N NOESY0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate95% H2O/5% D2O0.47.4ambient301
83D 1H-15N TOCSY0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate95% H2O/5% D2O0.47.4ambient301
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAll structure models are from rigid body modeling. The coordinate of Cytochrome C (Chain A) is from PDB entry 1YCC. All complex structure models are superimposed with Chain A.Azara
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number10
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingAzaraBoucher
2data analysisANSIGKraulis
3refinementX-PLOR NIHSchwieters, Kuszewski, Tjandra and Clore