6GVE
GAPDH-CP12-PRK complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth D] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
F [auth I] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
G [auth K] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
H [auth N] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
I [auth O] | SCOP2B Superfamily | GAPDH-like | 8068893 | 3000043 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth P] | PF02672 | e6gveP1 | A: alpha bundles | X: Long alpha-hairpin | H: CP12 (From Topology) | T: CP12 | F: PF02672 | ECOD (1.6) |
O [auth H] | PF02672 | e6gveH1 | A: alpha bundles | X: Long alpha-hairpin | H: CP12 (From Topology) | T: CP12 | F: PF02672 | ECOD (1.6) |
P [auth M] | PF02672 | e6gveM1 | A: alpha bundles | X: Long alpha-hairpin | H: CP12 (From Topology) | T: CP12 | F: PF02672 | ECOD (1.6) |
N [auth C] | PF02672 | e6gveC1 | A: alpha bundles | X: Long alpha-hairpin | H: CP12 (From Topology) | T: CP12 | F: PF02672 | ECOD (1.6) |
B [auth D] | PF02800 | e6gveD1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
B [auth D] | PF00044 | e6gveD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
C [auth A] | PF02800 | e6gveA1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
C [auth A] | PF00044 | e6gveA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
D [auth E] | PF02800 | e6gveE2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
D [auth E] | PF00044 | e6gveE1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
E [auth F] | PF02800 | e6gveF1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
E [auth F] | PF00044 | e6gveF2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
F [auth I] | PF02800 | e6gveI2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
F [auth I] | PF00044 | e6gveI1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
G [auth K] | PF02800 | e6gveK2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
G [auth K] | PF00044 | e6gveK1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
H [auth N] | PF02800 | e6gveN2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
H [auth N] | PF00044 | e6gveN1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
I [auth O] | PF02800 | e6gveO2 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain (From Topology) | T: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | F: PF02800 | ECOD (1.6) |
I [auth O] | PF00044 | e6gveO1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: PF00044 | ECOD (1.6) |
J | PF00485 | e6gveJ1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00485 | ECOD (1.6) |
K [auth B] | PF00485 | e6gveB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00485 | ECOD (1.6) |
L [auth G] | PF00485 | e6gveG1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00485 | ECOD (1.6) |
M [auth L] | PF00485 | e6gveL1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00485 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth D] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
C [auth A] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
D [auth E] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
E [auth F] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
F [auth I] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
G [auth K] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
H [auth N] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
I [auth O] | 3.30.360.10 | Alpha Beta | 2-Layer Sandwich | Dihydrodipicolinate Reductase | domain 2 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth P], N [auth C], O [auth H], P [auth M] | PF02672 | CP12 domain (CP12) | CP12 domain | - | Family |
PF02800 | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain (Gp_dh_C) | Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain | GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. C-terminal domain is a mixed alpha/antiparallel beta fold. | Domain | |
PF00044 | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain (Gp_dh_N) | Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain | GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold. | Domain | |
J, K [auth B], L [auth G], M [auth L] | PF00485 | Phosphoribulokinase / Uridine kinase family (PRK) | Phosphoribulokinase / Uridine kinase family | This family matches three types of P-loop containing kinases: phosphoribulokinases [1], uridine kinases [2] and bacterial pantothenate kinases(CoaA) [3]. Arabidopsis and other organisms have a dual uridine kinase/uracil phosphoribosyltransferase pro ... | Domain |