2MOE
Solution structure of MBD4 methyl-cytosine binding domain bound to methylated DNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2moea1 | Alpha and beta proteins (a+b) | DNA-binding domain | DNA-binding domain | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d2moea2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.890.10 | Alpha Beta | 2-Layer Sandwich | Methyl-cpg-binding Protein 2 | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01429 | Methyl-CpG binding domain (MBD) | Methyl-CpG binding domain | The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [1]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-s ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001739 | Methyl-CpG DNA binding | Domain | |
IPR045138 | Methyl-CpG binding protein MeCP2/MBD4 | Family | |
IPR017352 | Methyl-CpG-binding domain protein 4 | Family | |
IPR011257 | DNA glycosylase | Homologous Superfamily | |
IPR016177 | DNA-binding domain superfamily | Homologous Superfamily |