1Q0D
Crystal structure of Ni-containing superoxide dismutase with Ni-ligation corresponding to the oxidized state
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Nickel-containing superoxide dismutase NiSOD | 8038385 | 3001167 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF09055 | e1q0dB1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
E | PF09055 | e1q0dE1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
F | PF09055 | e1q0dF1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
G | PF09055 | e1q0dG1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
I | PF09055 | e1q0dI1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
J | PF09055 | e1q0dJ1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
K | PF09055 | e1q0dK1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
A | PF09055 | e1q0dA1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
C | PF09055 | e1q0dC1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
D | PF09055 | e1q0dD1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
H | PF09055 | e1q0dH1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
L | PF09055 | e1q0dL1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Nickel-containing superoxide dismutase, NiSOD (From Topology) | T: Nickel-containing superoxide dismutase, NiSOD | F: PF09055 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09055 | Nickel-containing superoxide dismutase (Sod_Ni) | Nickel-containing superoxide dismutase | Nickel containing superoxide dismutase (NiSOD) is a metalloenzyme containing a hexameric assembly of right-handed 4-helix bundles of up-down-up-down topology with an N-terminal His-Cys-X-X-Pro-Cys-Gly-X-Tyr motif that chelates the active site Ni ions ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Superoxide dismutase [Ni] | - |