9Z4Q | pdb_00009z4q

Cryo-EM structure of human nonmuscle myosin-2B, Class 3


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 9Z4Q

This is version 1.0 of the entry. See complete history

Literature

Structural basis of nonmuscle myosin-2 autoinhibition mechanisms.

Heissler, S.M.Grandinetti, G.Sellers, J.R.Chinthalapudi, K.

(2026) Nat Commun 

  • DOI: https://doi.org/10.1038/s41467-026-74674-w
  • Primary Citation Related Structures: 
    9Z3W, 9Z3Z, 9Z40, 9Z4Q

  • PubMed Abstract: 

    Nonmuscle myosin-2 (NM2) is a fundamental actin-based mechanochemical ATPase that regulates cellular architecture, migration, adhesion, and force generation across diverse biological contexts. NM2 function is tightly regulated by a structural transition between an autoinhibited monomeric (10S) conformation in which ATPase activity, actin binding, and filament assembly are coordinately suppressed and an enzymatically active, filamentous conformation. The autoinhibited conformation is critical for the spatial and temporal control of contractility in nonmuscle cells, yet structural insights into the 10S conformation remain largely elusive. Here, we report a ~53-nm elongated full-length structure of NM2B in the 10S conformation and four distinct cryo-EM structures representing the conformational landscape within the human NM2B 10S state. These structures reveal a tri-segmented tail fold that sequesters interfaces essential for actin binding and filament assembly. The asymmetric arrangement of myosin heavy and light chains provides a mechanistic foundation for understanding how regulatory post-translational modifications and disease-associated mutations shift NM2 conformational equilibria and may enable the development of structure-based interventions for cytoskeletal diseases including hearing loss, neurodegeneration, and cancer.


  • Organizational Affiliation
    • Department of Physiology and Cell Biology, Dorothy M. Davis Heart and Lung Research Institute, The Ohio State University College of Medicine, Columbus, OH, USA. sarah.heissler@osumc.edu.

Macromolecule Content 

  • Total Structure Weight: 533.32 kDa 
  • Atom Count: 27,538 
  • Modeled Residue Count: 3,381 
  • Deposited Residue Count: 4,598 
  • Unique protein chains: 3

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Myosin-10
A, B
1,976Homo sapiensMutation(s): 0 
Gene Names: MYH10
UniProt & NIH Common Fund Data Resources
Find proteins for P35580 (Homo sapiens)
Explore P35580 
Go to UniProtKB:  P35580
PHAROS:  P35580
GTEx:  ENSG00000133026 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP35580
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Myosin light polypeptide 6
C, F
151Homo sapiensMutation(s): 0 
Gene Names: MYL6
UniProt & NIH Common Fund Data Resources
Find proteins for P60660 (Homo sapiens)
Explore P60660 
Go to UniProtKB:  P60660
PHAROS:  P60660
GTEx:  ENSG00000092841 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60660
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Myosin regulatory light chain 12B
D, E
172Homo sapiensMutation(s): 0 
Gene Names: MYL12BMRLC2MYLC2B
UniProt & NIH Common Fund Data Resources
Find proteins for O14950 (Homo sapiens)
Explore O14950 
Go to UniProtKB:  O14950
PHAROS:  O14950
GTEx:  ENSG00000118680 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO14950
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM143539

Revision History  (Full details and data files)

  • Version 1.0: 2026-07-08
    Type: Initial release