9WXV | pdb_00009wxv

Cryo-EM structure of TMEM63A-digitonin-cholesterol


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

TMEM63 proteins act as mechanically activated cholesterol modulated lipid scramblases contributing to membrane mechano-resilience.

Lin, Y.Zhou, Z.Han, Y.Cheng, D.Wang, H.Ju, L.A.Zhang, Y.Cox, C.D.Corry, B.

(2026) Nat Commun 

  • DOI: https://doi.org/10.1038/s41467-026-68919-x
  • Primary Citation of Related Structures:  
    9WXV

  • PubMed Abstract: 

    OSCA/TMEM63 mechanosensitive ion channels play critical physiological roles in plants and animals. These channels bear structural homology to the dual functional TMEM16 family, and OSCA1.2 was recently shown to form a lipid-lined ion conduction pathway in the open state. This raised the question of whether members of the OSCA/TMEM63 family may also function as mechanically activated lipid scramblases. Using a combination of in vitro and cellular assays with computational techniques, we show that phospholipids can be translocated through the open pores of OSCA1.1/1.2/2.2 and TMEM63A/B proteins, suggesting a dual ion channel and lipid scramblase function for members of this protein family. We characterize the effects of mutating key groove lining residues demonstrating that different residues form bottlenecks for lipids and ions respectively and show that cholesterol inhibits lipid scrambling by stabilizing the closed state and slowing translocation through the open pore. We show that lipid scrambling in TMEM63 proteins can be activated by mechanical forces in the membrane, making these mechanically activated lipid scramblases. Finally, we demonstrate that this activity is important for the mechanically induced morphological remodeling of biological membranes and the resilience of cells to high mechanical forces.


  • Organizational Affiliation
    • Research School of Biology, Australian National University, Acton, ACT, Australia.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Mechanosensitive cation channel TMEM63A812Homo sapiensMutation(s): 0 
Gene Names: TMEM63AKIAA0489KIAA0792
UniProt & NIH Common Fund Data Resources
Find proteins for O94886 (Homo sapiens)
Explore O94886 
Go to UniProtKB:  O94886
PHAROS:  O94886
GTEx:  ENSG00000196187 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO94886
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.40 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Australian Research Council (ARC)AustraliaDP200100860
Australian Research Council (ARC)AustraliaFT220100159
Chinese Academy of SciencesChina2022ZD0207400

Revision History  (Full details and data files)

  • Version 1.0: 2026-02-11
    Type: Initial release