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 9WKT | pdb_00009wkt

mature Mba1, UniProt P38300, residues 34-278, Saccharomyces cerevisiae


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history. 

Literature

Structural basis of Saccharomyces cerevisiae Mba1 in mitochondrial co-translational membrane insertion.

Yang, J., Ruan, M., Bai, D., Liu, Y., Wang, Y., Tang, H., Li, Y., Wang, J.

(2026) J Struct Biol 218: 108359-108359

  • DOI: https://doi.org/10.1016/j.jsb.2026.108359
  • Primary Citation Related Structures: 
    9WKT

  • PubMed Abstract: 

    Co-translational membrane insertion is essential for the efficient integration of mitochondrially encoded proteins into the inner mitochondrial membrane (IMM) and is critical for respiratory chain biogenesis. Mba1 is a mitochondrial ribosome-associated protein implicated in coupling mitochondrial translation with inner-membrane protein biogenesis, but its structural basis of function remains poorly understood. Here, we determined the solution structure of mature Saccharomyces cerevisiae Mba1 (mMba1) using multidimensional nuclear magnetic resonance (NMR) spectroscopy. The structure reveals a compact α + β fold with a central hydrophobic cavity and distinct charged surface regions. Ribosome titration, paramagnetic relaxation enhancement, and Cox2-derived peptide titration identified several regions of mMba1 that are affected by these different interaction conditions. Mapping these regions onto the structure reveals spatially distinct surfaces that may contribute to ribosome association, membrane proximity, and interactions with hydrophobic peptide segments. These findings provide a structural framework for interpreting previous functional studies of Mba1 and support a working model in which Mba1 may function as a peripheral adaptor at the mitoribosome-inner membrane interface. Further structural and biochemical studies will be required to establish the molecular mechanisms underlying these interactions.


  • Organizational Affiliation: 
    • High Magnetic Field Laboratory, Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China.

Macromolecule Content 

  • Total Structure Weight: 23.97 kDa 
  • Atom Count: 1,689 
  • Modeled Residue Count: 210 
  • Deposited Residue Count: 210 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Inner membrane mitoribosome receptor MBA1, mitochondrial210Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: MBA1, YBR185C, YBR1307
UniProt
Find proteins for P38300 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P38300 
Go to UniProtKB:  P38300
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP38300
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China32401031
National Natural Science Foundation of China (NSFC)China32471281

Revision History  (Full details and data files)

  • Version 1.0: 2026-09-16
    Type: Initial release