9UVA | pdb_00009uva

Structures of multiple states of the nicotinamide nucleotide transhydrogenase from Escherichia coli

PDB DOI: https://doi.org/10.2210/pdb9UVA/pdb
EM Map EMD-64529: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Escherichia coli K-12
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-05-09 Released: 2026-05-27
Deposition Author(s): Zhu, J., Gennis, R.B., Zhang, K., Li, J.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 9UVA

This is version 1.0 of the entry. See complete history.

Literature

Structures of multiple states of the nicotinamide nucleotide transhydrogenase from Escherichia coli

Zhu, J., Gennis, R.B., Zhang, K., Li, J.

To be published.

Macromolecule Content

Total Structure Weight: 199.38 kDa
Atom Count: 13,177
Modeled Residue Count: 1,763
Deposited Residue Count: 1,876
Unique protein chains: 3

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NAD(P) transhydrogenase subunit beta	A [auth B], B [auth A]	462	Escherichia coli K-12	Mutation(s): 0 Gene Names: pntB, b1602, JW1594 EC: 7.1.1.1
UniProt
Find proteins for P0AB67 (Escherichia coli (strain K12)) Explore P0AB67 Go to UniProtKB: P0AB67
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P0AB67
Sequence Annotations Expand
Reference Sequence

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
NAD(P) transhydrogenase subunit alpha	C, D	99	Escherichia coli K-12	Mutation(s): 0 Gene Names: pntA, b1603, JW1595 EC: 7.1.1.1
UniProt
Find proteins for P07001 (Escherichia coli (strain K12)) Explore P07001 Go to UniProtKB: P07001
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P07001
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
NAD(P) transhydrogenase subunit alpha	E, F	377	Escherichia coli K-12	Mutation(s): 0 Gene Names: pntA, b1603, JW1595 EC: 7.1.1.1
UniProt
Find proteins for P07001 (Escherichia coli (strain K12)) Explore P07001 Go to UniProtKB: P07001
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P07001
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX	1.20.1_4487:

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2026-05-27

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32201038

Revision History (Full details and data files)

Version 1.0: 2026-05-27
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.