Cryo-EM and single molecule visualization unravel the role of human condensin II activation by M18BP1 in driving DNA compaction
Borsellini, A., Vannini, A.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
Macromolecule Content 
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 2 | 1,197 | Homo sapiens | Mutation(s): 0  Gene Names: SMC2, CAPE, SMC2L1, PRO0324 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  O95347 GTEx:  ENSG00000136824  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O95347 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Condensin-2 complex subunit D3 | B [auth D] | 1,498 | Homo sapiens | Mutation(s): 0  Gene Names: NCAPD3, CAPD3, KIAA0056 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  P42695 GTEx:  ENSG00000151503  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P42695 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Condensin-2 complex subunit H2 | C [auth H] | 605 | Homo sapiens | Mutation(s): 0  Gene Names: NCAPH2, CAPH2 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  Q6IBW4 GTEx:  ENSG00000025770  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6IBW4 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Condensin-2 complex subunit G2 | D [auth G] | 1,143 | Homo sapiens | Mutation(s): 0  Gene Names: NCAPG2, LUZP5 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  Q86XI2 GTEx:  ENSG00000146918  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q86XI2 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 5 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Structural maintenance of chromosomes protein 4 | E [auth B] | 1,288 | Homo sapiens | Mutation(s): 0  Gene Names: SMC4, CAPC, SMC4L1 | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
PHAROS:  Q9NTJ3 GTEx:  ENSG00000113810  | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9NTJ3 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADP Download:Ideal Coordinates CCD File | F [auth A], H [auth B] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
| BEF Download:Ideal Coordinates CCD File | G [auth A], I [auth B] | BERYLLIUM TRIFLUORIDE ION Be F3 OGIAHMCCNXDTIE-UHFFFAOYSA-K | |||
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION |
| Funding Organization | Location | Grant Number |
|---|---|---|
| Other private | -- |