9RSS | pdb_00009rss

Cryo-EM structure of the Target of Rapamycin Complex 2 (TORC2) with the Avo1 PH domain


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.01 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

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Literature

Structural basis for TORC2 activation.

Zou, L.Tettamanti, M.G.Gabus, C.Bergmann, A.Loewith, R.Tafur, L.

(2026) Mol Cell 86: 1560-1573.e5

  • DOI: https://doi.org/10.1016/j.molcel.2026.03.022
  • Primary Citation Related Structures: 
    9RSQ, 9RSS, 9RST

  • PubMed Abstract: 

    The target of rapamycin complex 2 (TORC2) is a central node in signaling feedback loops, serving to maintain the biophysical homeostasis of the plasma membrane (PM). How TORC2 is regulated by mechanical perturbation of the PM is not well understood. To address this, we determined the cryo-electron microscopy structure of endogenous yeast TORC2 at up to 2.2 Å resolution. Our model refines the position and interactions of TORC2-specific subunits, providing a structural basis for the differential assembly of Tor2 into TORC2. Furthermore, we observe the insertion of the pleckstrin-homology domain of the Avo1 subunit into the Tor2 active site, providing a regulatory mechanism mediated by phosphoinositides. Structure-guided functional experiments reveal a potential TORC2 membrane-binding surface and a positively charged pocket in the Avo3 subunit that is necessary for TORC2 activation. Collectively, our data suggest that signaling phosphoinositides activate TORC2 by membrane-induced structural rearrangements via the concerted action of conserved regulatory subunits.


  • Organizational Affiliation
    • Department of Molecular and Cellular Biology, University of Geneva, Geneva, Switzerland.

Macromolecule Content 

  • Total Structure Weight: 1,441.83 kDa 
  • Atom Count: 68,304 
  • Modeled Residue Count: 8,458 
  • Deposited Residue Count: 12,704 
  • Unique protein chains: 6

Macromolecules

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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Target of rapamycin complex subunit LST8A [auth B],
B [auth I]
303Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P41318 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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UniProt GroupP41318
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Reference Sequence
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Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
Serine/threonine-protein kinase TOR2C [auth A],
H [auth F]
2,474Saccharomyces cerevisiaeMutation(s): 0 
EC: 2.7.1.67 (PDB Primary Data), 2.7.11.1 (PDB Primary Data)
UniProt
Find proteins for P32600 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Reference Sequence
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Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
Target of rapamycin complex 2 subunit TSC11D [auth C],
I [auth J]
1,430Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P40061 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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UniProt GroupP40061
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Reference Sequence
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Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
Target of rapamycin complex 2 subunit AVO2E [auth D],
J [auth K]
426Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for Q04749 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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UniProt GroupQ04749
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Reference Sequence
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Entity ID: 5
MoleculeChains  Sequence LengthOrganismDetailsImage
Target of rapamycin complex 2 subunit BIT61F [auth E],
K [auth L]
543Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P47041 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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UniProt GroupP47041
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Reference Sequence
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Entity ID: 6
MoleculeChains  Sequence LengthOrganismDetailsImage
Target of rapamycin complex 2 subunit AVO1G,
L [auth M]
1,176Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for Q08236 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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UniProt GroupQ08236
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.01 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research Council (ERC)European Union--
Swiss National Science FoundationSwitzerland--

Revision History  (Full details and data files)

  • Version 1.0: 2026-05-06
    Type: Initial release