9QOP | pdb_00009qop

Binary complex of human Importin-9 with one homodimer of Akirin-2

PDB DOI: https://doi.org/10.2210/pdb9QOP/pdb
EM Map EMD-53266: EMDB EMDataResource

Classification: PROTEIN TRANSPORT
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-03-26 Released: 2026-01-28
Deposition Author(s): Brunner, H.L., Grundmann, L., David, H.
Funding Organization(s): H2020 Marie Curie Actions of the European Commission, Austrian Science Fund

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.70 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

A multivalent adaptor mechanism drives the nuclear import of proteasomes

Brunner, H., Kalis, R.W., Grundmann, L., Hodakova, Z., Koskova, Z., Grishkovskaya, I., de Almeida, M., Hinterndorfer, M., Hoefflin, S., Andersch, F., Kotisch, H., Dickmanns, A., Cuylen-Haering, S., Zuber, J., Haselbach, D.

To be published.

Macromolecule Content

Total Structure Weight: 161.11 kDa
Atom Count: 4,332
Modeled Residue Count: 1,083
Deposited Residue Count: 1,447
Unique protein chains: 2

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Akirin-2	A [auth B], C	203	Homo sapiens	Mutation(s): 0 Gene Names: AKIRIN2, C6orf166
UniProt & NIH Common Fund Data Resources
Find proteins for Q53H80 (Homo sapiens) Explore Q53H80 Go to UniProtKB: Q53H80
PHAROS: Q53H80 GTEx: ENSG00000135334
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q53H80
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Importin-9	B [auth A]	1,041	Homo sapiens	Mutation(s): 0 Gene Names: IPO9, IMP9, KIAA1192, RANBP9, HSPC273
UniProt & NIH Common Fund Data Resources
Find proteins for Q96P70 (Homo sapiens) Explore Q96P70 Go to UniProtKB: Q96P70
PHAROS: Q96P70 GTEx: ENSG00000198700
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q96P70
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.70 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2026-01-28

Deposition Author(s):

Funding Organization	Location	Grant Number
H2020 Marie Curie Actions of the European Commission	European Union	847548
Austrian Science Fund	Austria	10.55776/F79

Revision History (Full details and data files)

Version 1.0: 2026-01-28
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.