9P3F | pdb_00009p3f

Structure of M. thermoresistible Rv3035 in complex with M. tuberculosis FecB

• PDB DOI: https://doi.org/10.2210/pdb9P3F/pdb

• Classification: PROTEIN BINDING
• Organism(s): Mycolicibacterium thermoresistibile, Mycobacterium tuberculosis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2025-06-13 Released: 2026-03-04 
• Deposition Author(s): Cuthbert, B.J., Harding, C.D., Mendoza, J., Goulding, C.W.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.35 Å
• R-Value Free: 
  0.255 (Depositor), 0.254 (DCC) 
• R-Value Work: 
  0.228 (Depositor), 0.228 (DCC) 
• R-Value Observed: 
  0.231 (Depositor) 

Starting Models: experimental

Literature

Structures of apo Rv3035 and Rv3035-FecB complex

Klevorn, T., Cuthbert, B.J., Hardy, C.D., Mendoza, J., Goulding, C.W., Ehrt, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 77.39 kDa 
• Atom Count: 4,749 
• Modeled Residue Count: 706 
• Deposited Residue Count: 741 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rv3035, BamB-like protein binding protein	A	409	Mycolicibacterium thermoresistibile	Mutation(s): 0  Gene Names: RMCT_3585
UniProt
Find proteins for A0A117INB7 (Mycolicibacterium thermoresistibile) Explore A0A117INB7  Go to UniProtKB:  A0A117INB7

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Probable FEIII-dicitrate-binding periplasmic lipoprotein FecB	B	332	Mycobacterium tuberculosis	Mutation(s): 0  Gene Names: fecB
UniProt
Find proteins for A0AB73YC50 (Mycobacterium tuberculosis) Explore A0AB73YC50  Go to UniProtKB:  A0AB73YC50

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
GOL	C [auth A], D [auth A], E [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
NA	F [auth B]	SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.35 Å
• R-Value Free:  0.255 (Depositor), 0.254 (DCC) 
• R-Value Work:  0.228 (Depositor), 0.228 (DCC) 
• R-Value Observed: 0.231 (Depositor) 

Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 154.882	α = 90
b = 154.882	β = 90
c = 98.88	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History 

& Funding Information

Deposition Data

• Released Date: 2026-03-04 
Deposition Author(s): Cuthbert, B.J., Harding, C.D., Mendoza, J., Goulding, C.W.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2026-03-04
  Type: Initial release