9NZ6 | pdb_00009nz6

Oxidoreductase isolated from Xanthomonas citri pv. citri A306

PDB DOI: https://doi.org/10.2210/pdb9NZ6/pdb

Classification: OXIDOREDUCTASE
Organism(s): Xanthomonas citri pv. citri
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2025-03-31 Released: 2025-04-09
Deposition Author(s): Santos, L.S., Torres, S.C., Balan, A.
Funding Organization(s): Sao Paulo Research Foundation (FAPESP)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.98 Å
R-Value Free:
0.276 (Depositor), 0.278 (DCC)
R-Value Work:
0.231 (Depositor), 0.233 (DCC)
R-Value Observed:
0.235 (Depositor)

Starting Model: in silico
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This is version 1.0 of the entry. See complete history.

Literature

Oxidoreductase isolated from Xanthomonas citri pv. citri A306

Santos, L.S., Torres, S.C., Balan, A.

To be published.

Macromolecule Content

Total Structure Weight: 322.39 kDa
Atom Count: 19,052
Modeled Residue Count: 2,439
Deposited Residue Count: 2,920
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Oxidoreductase	A, B, C, D, E A, B, C, D, E, F, G, H	365	Xanthomonas citri pv. citri	Mutation(s): 0 Gene Names: XAC3199
UniProt
Find proteins for A0AAI7ZHB9 (Xanthomonas axonopodis pv. citri (strain 306)) Explore A0AAI7ZHB9 Go to UniProtKB: A0AAI7ZHB9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0AAI7ZHB9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.98 Å
R-Value Free: 0.276 (Depositor), 0.278 (DCC)
R-Value Work: 0.231 (Depositor), 0.233 (DCC)
R-Value Observed: 0.235 (Depositor)

Space Group: P 2 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 129.62	α = 90
b = 129.756	β = 90
c = 228.937	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
autoPROC	data reduction
autoPROC	data scaling
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2025-04-09

Deposition Author(s):

Funding Organization	Location	Grant Number
Sao Paulo Research Foundation (FAPESP)	Brazil	2023/15874-8

Revision History (Full details and data files)

Version 1.0: 2025-04-09
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.