9NCQ | pdb_00009ncq

Cryo-EM structure of Fas-FADD complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.51 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 9NCQ

This is version 1.1 of the entry. See complete history

Literature

Assembly and activation of the death-inducing signaling complex.

Fosuah, E.Shen, Z.Xie, J.Wang, C.Lin, Q.Fu, T.M.

(2025) Proc Natl Acad Sci U S A 122: e2504819122-e2504819122

  • DOI: https://doi.org/10.1073/pnas.2504819122
  • Primary Citation Related Structures: 
    9N94, 9NCQ

  • PubMed Abstract: 

    The death-inducing signaling complex (DISC), comprising Fas, Fas-associated death domain (FADD), and caspase-8, initiates extrinsic apoptosis. Using cryogenic electron microscopy (cryo-EM), we show that Fas and FADD death domains (DDs) form an asymmetric 7:5 oligomer, which promotes FADD death effector domain (DED) filament formation. Structural analysis reveals that FADD DED filaments closely resemble caspase-8 tandem DED filaments, suggesting that FADD DED serves as a nucleation scaffold for caspase-8 assembly. These findings provide a mechanistic framework for how DISC assembly initiates apoptosis and amplifies signaling via higher-order oligomerization.


  • Organizational Affiliation
    • Department of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH 43210.

Macromolecule Content 

  • Total Structure Weight: 133.77 kDa 
  • Atom Count: 7,550 
  • Modeled Residue Count: 1,059 
  • Deposited Residue Count: 1,177 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Tumor necrosis factor receptor superfamily member 696Homo sapiensMutation(s): 0 
Gene Names: FASAPT1FAS1TNFRSF6
UniProt & NIH Common Fund Data Resources
Find proteins for P25445 (Homo sapiens)
Explore P25445 
Go to UniProtKB:  P25445
PHAROS:  P25445
GTEx:  ENSG00000026103 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP25445
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
FAS-associated death domain proteinH,
I,
J [auth L],
K,
L [auth J]
101Homo sapiensMutation(s): 0 
Gene Names: FADDMORT1GIG3
UniProt & NIH Common Fund Data Resources
Find proteins for Q13158 (Homo sapiens)
Explore Q13158 
Go to UniProtKB:  Q13158
PHAROS:  Q13158
GTEx:  ENSG00000168040 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ13158
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.51 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2025-11-05
    Type: Initial release
  • Version 1.1: 2025-11-12
    Changes: Data collection, Database references