9MUH | pdb_00009muh

Mus musculus TASK-1 (KCNK3) in MSP1E3D1 lipid nanodisc at pH 6.0 and 100 mM KCl


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 9MUH

This is version 1.1 of the entry. See complete history

Literature

Structural basis for proton inhibition of the two-pore domain K + channel TASK-1.

Docter, T.Lee, N.S.Reid, M.S.Brohawn, S.G.

(2026) Structure 

  • DOI: https://doi.org/10.1016/j.str.2026.05.002
  • Primary Citation Related Structures: 
    9MUH

  • PubMed Abstract: 

    TASK-1 is a pH-sensitive two-pore domain K + channel implicated in diseases including pulmonary arterial hypertension (PAH) and developmental delay with sleep apnea (DDSA). Structures of TASK-1 have been captured with an open external gate, but the structural basis for external proton inhibition is incompletely understood. Here, we present a cryo-EM structure of TASK-1 at pH 6.0 and 100 mM K + , revealing a closed extracellular gate. pH-regulation of TASK-1 involves a C-type selectivity filter gate similar to TASK-3, but distinct from other K2Ps, in which histidine protonation leads to the formation of a hydrophobic seal above the filter. We find that a PAH-associated loss-of-function mutation near the outer gate increases proton sensitivity, while DDSA-associated and other gain-of-function mutations near the inner X-gate and cavity reduce proton sensitivity. These data reveal the mechanism for pH regulation of TASK-1, illustrate differences in C-type gating among K2Ps, and suggest allosteric communication between inner and outer gates.


  • Organizational Affiliation
    • Department of Molecular & Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.

Macromolecule Content 

  • Total Structure Weight: 61.47 kDa 
  • Atom Count: 4,062 
  • Modeled Residue Count: 498 
  • Deposited Residue Count: 530 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Potassium channel subfamily K member 3
A, B
265Mus musculusMutation(s): 0 
Gene Names: Kcnk3CtbakTaskTask1
UniProt
Find proteins for O35111 (Mus musculus)
Explore O35111 
Go to UniProtKB:  O35111
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO35111
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.21_5207
RECONSTRUCTIONcryoSPARC

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM145869

Revision History  (Full details and data files)

  • Version 1.0: 2026-01-28
    Type: Initial release
  • Version 1.1: 2026-06-17
    Changes: Data collection, Database references