9MRQ | pdb_00009mrq

Deposited: 2025-01-08 Released: 2025-10-08
Deposition Author(s): Bosch, B., Lilic, M., Campbell, E.A.
Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Macromolecule Content

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit alpha	A, B	347	Mycobacterium tuberculosis H37Rv	Mutation(s): 0 Gene Names: rpoA, Rv3457c, MTCY13E12.10c EC: 2.7.7.6
UniProt
Find proteins for P9WGZ1 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGZ1 Go to UniProtKB: P9WGZ1
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P9WGZ1
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Reference Sequence

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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit beta	C	1,178	Mycobacterium tuberculosis H37Rv	Mutation(s): 0 Gene Names: rpoB, Rv0667, MTCI376.08c EC: 2.7.7.6
UniProt
Find proteins for P9WGY9 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGY9 Go to UniProtKB: P9WGY9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P9WGY9
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Reference Sequence

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| 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit beta'	D	1,318	Mycobacterium tuberculosis H37Rv	Mutation(s): 0 Gene Names: rpoC, Rv0668, MTCI376.07c EC: 2.7.7.6
UniProt
Find proteins for P9WGY7 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGY7 Go to UniProtKB: P9WGY7
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P9WGY7
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Reference Sequence

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| 3D Structure

Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
DNA-directed RNA polymerase subunit omega	E	110	Mycobacterium tuberculosis H37Rv	Mutation(s): 0 Gene Names: rpoZ, Rv1390, MTCY21B4.07 EC: 2.7.7.6
UniProt
Find proteins for P9WGY5 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGY5 Go to UniProtKB: P9WGY5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P9WGY5
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Reference Sequence

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Molecule	Chains	Length	Organism
Entity ID: 5
DNA (29-MER)	F [auth P]	54	Mycobacterium tuberculosis
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Reference Sequence

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Molecule	Chains	Length	Organism
Entity ID: 6
DNA (5'-D(PGPCPTPAPGPTPGPGPCPGPGPCPGPAPAPTPAPCPCPCPTPC)-3')	G [auth O]	54	Mycobacterium tuberculosis
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Reference Sequence

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Molecule	Chains	Length	Organism
Entity ID: 7
RNA (5'-R(PCPGPGPAPGPAPGPGPUPA)-3')	H [auth R]	20	Mycobacterium tuberculosis
Sequence Annotations Expand
Reference Sequence

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
A1BNV (Subject of Investigation/LOI) Query on A1BNV Download:Ideal Coordinates CCD File SDF format, chain I [auth C] MOL2 format, chain I [auth C] mmCIF format, chain I [auth C]	I [auth C]	N-[2-(1,1-dioxo-1lambda~6~-thiomorpholin-4-yl)phenyl]-Nalpha-(2-fluorobenzoyl)-D-phenylalaninamide C₂₆ H₂₆ F N₃ O₄ S GDQUFAMUOYIJII-HSZRJFAPSA-N		Interactions Focus chain I [auth C] Interactions & Density Focus chain I [auth C]
ZN Query on ZN Download:Ideal Coordinates CCD File SDF format, chain K [auth D] SDF format, chain J [auth D] MOL2 format, chain K [auth D] MOL2 format, chain J [auth D] mmCIF format, chain K [auth D] mmCIF format, chain J [auth D]	J [auth D], K [auth D]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Interactions Focus chain J [auth D] Focus chain K [auth D] Interactions & Density Focus chain J [auth D] Focus chain K [auth D]
MG Query on MG Download:Ideal Coordinates CCD File SDF format, chain L [auth D] MOL2 format, chain L [auth D] mmCIF format, chain L [auth D]	L [auth D]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain L [auth D] Interactions & Density Focus chain L [auth D]