Download MendeleyCo-inhibition of Transcription Reduces Rifampicin Resistance and Enhances Killing of Mycobacterium tuberculosis.
Barbara, B., Lilic, M., Campbell, E.A.To be published.
9MRQ | pdb_00009mrq
Mycobacterium tuberculosis RNA polymerase elongation complex bound to inhibitor N-aroyl-N-aryl-phenylalanine amide (AAP)-SO2
- PDB DOI: https://doi.org/10.2210/pdb9MRQ/pdb
- NAKB: 9MRQ
- EM Map EMD-48561: EMDB EMDataResource
- Classification: TRANSCRIPTION, TRANSFERASE/INHIBITOR
- Organism(s): Mycobacterium tuberculosis H37Rv, Mycobacterium tuberculosis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2025-01-08 Released: 2025-10-08
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.97 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DNA-directed RNA polymerase subunit alpha | 347 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: rpoA, Rv3457c, MTCY13E12.10c EC: 2.7.7.6 |  | |
UniProt | |||||
Find proteins for P9WGZ1 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGZ1 Go to UniProtKB: P9WGZ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WGZ1 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DNA-directed RNA polymerase subunit beta | 1,178 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: rpoB, Rv0667, MTCI376.08c EC: 2.7.7.6 |  | |
UniProt | |||||
Find proteins for P9WGY9 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGY9 Go to UniProtKB: P9WGY9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WGY9 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DNA-directed RNA polymerase subunit beta' | 1,318 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: rpoC, Rv0668, MTCI376.07c EC: 2.7.7.6 |  | |
UniProt | |||||
Find proteins for P9WGY7 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGY7 Go to UniProtKB: P9WGY7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WGY7 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| DNA-directed RNA polymerase subunit omega | 110 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0 Gene Names: rpoZ, Rv1390, MTCY21B4.07 EC: 2.7.7.6 |  | |
UniProt | |||||
Find proteins for P9WGY5 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WGY5 Go to UniProtKB: P9WGY5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WGY5 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar nucleic acids by:
(by identity cutoff) | 3D Structure
Entity ID: 5 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| DNA (29-MER) | F [auth P] | 54 | Mycobacterium tuberculosis |  | |
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by:
(by identity cutoff) | 3D Structure
Entity ID: 6 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| DNA (5'-D(P*GP*CP*TP*AP*GP*TP*GP*GP*CP*GP*GP*CP*GP*AP*AP*TP*AP*CP*CP*CP*TP*C)-3') | G [auth O] | 54 | Mycobacterium tuberculosis |  | |
Sequence AnnotationsExpand | |||||
| |||||
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 7 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| RNA (5'-R(P*CP*GP*GP*AP*GP*AP*GP*GP*UP*A)-3') | H [auth R] | 20 | Mycobacterium tuberculosis |  | |
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| A1BNV (Subject of Investigation/LOI) Query on A1BNV | I [auth C] | N-[2-(1,1-dioxo-1lambda~6~-thiomorpholin-4-yl)phenyl]-Nalpha-(2-fluorobenzoyl)-D-phenylalaninamide C26 H26 F N3 O4 S GDQUFAMUOYIJII-HSZRJFAPSA-N |  | ||
| ZN Query on ZN | J [auth D], K [auth D] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| MG Query on MG | L [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.97 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| MODEL REFINEMENT | PHENIX | 1.20.1_4487 |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-10-08 Deposition Author(s): Bosch, B., Lilic, M., Campbell, E.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | -- |
Revision History (Full details and data files)
- Version 1.0: 2025-10-08
Type: Initial release
