9JUA | pdb_00009jua

The complex of Eny2B and Sgf11 of Drosophila melanogaster

PDB DOI: https://doi.org/10.2210/pdb9JUA/pdb

Classification: TRANSCRIPTION
Organism(s): Drosophila melanogaster
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2024-10-07 Released: 2025-10-08
Deposition Author(s): Boyko, K.M., Bonchuk, A.N., Nikolaeva, A.Y., Arkova, O.V., Belova, E.V., Georgiev, P.G., Popov, V.O.
Funding Organization(s): Russian Science Foundation

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.55 Å
R-Value Free:
0.262 (Depositor), 0.266 (DCC)
R-Value Work:
0.214 (Depositor), 0.220 (DCC)
R-Value Observed:
0.216 (Depositor)

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history.

Literature

The complex of Eny2B and Sgf11 of Drosophila melanogaster

Boyko, K.M., Nikolaeva, A.Y., Bonchuk, A.N., Arkova, O.V., Belova, E.V., Georgiev, P.G., Popov, V.O.

To be published.

Macromolecule Content

Total Structure Weight: 30.65 kDa
Atom Count: 1,532
Modeled Residue Count: 207
Deposited Residue Count: 274
Unique protein chains: 2

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Enhancer of yellow 2b transcription factor	A, B [auth C]	95	Drosophila melanogaster	Mutation(s): 0 Gene Names: e(y)2b, CG14612
UniProt
Find proteins for Q9VI60 (Drosophila melanogaster) Explore Q9VI60 Go to UniProtKB: Q9VI60
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9VI60
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
SAGA-associated factor 11 homolog	C [auth B], D	42	Drosophila melanogaster	Mutation(s): 0 Gene Names: Sgf11, CG13379
UniProt
Find proteins for Q9VVR6 (Drosophila melanogaster) Explore Q9VVR6 Go to UniProtKB: Q9VVR6
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q9VVR6
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.55 Å
R-Value Free: 0.262 (Depositor), 0.266 (DCC)
R-Value Work: 0.214 (Depositor), 0.220 (DCC)
R-Value Observed: 0.216 (Depositor)

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 45.958	α = 90
b = 57.554	β = 90.03
c = 98.886	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
Aimless	data scaling
CrysalisPro	data reduction
PHASER	phasing

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2025-10-08

Deposition Author(s):

Nikolaeva, A.Y.

Funding Organization	Location	Grant Number
Russian Science Foundation	Russian Federation	19-74-30026

Revision History (Full details and data files)

Version 1.0: 2025-10-08
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.