9JSD | pdb_00009jsd

Cryo-EM structure of Snf7 linker extension

• PDB DOI: https://doi.org/10.2210/pdb9JSD/pdb
• EM Map EMD-61770: EMDB EMDataResource

• Classification: PROTEIN TRANSPORT
• Organism(s): Saccharomyces cerevisiae S288C
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2024-09-30 Released: 2025-10-08 
• Deposition Author(s): Shen, Q.T., Liu, M.D.
• Funding Organization(s): National Science Foundation (NSF, China)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 7.37 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Cryo-EM structure of Snf7 linker extension

Shen, Q.T., Liu, M.D.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by (software)

Biological Assembly Evidence: electron microscopy

Macromolecule Content 

• Total Structure Weight: 27.88 kDa 
• Atom Count: 1,046 
• Modeled Residue Count: 132 
• Deposited Residue Count: 255 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Vacuolar-sorting protein SNF7	A	255	Saccharomyces cerevisiae S288C	Mutation(s): 0  Gene Names: SNF7, DID1, VPS32, YLR025W
UniProt
Find proteins for P39929 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P39929  Go to UniProtKB:  P39929

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 7.37 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2025-10-08 
Deposition Author(s): Shen, Q.T., Liu, M.D.

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Funding Organization	Location	Grant Number
National Science Foundation (NSF, China)	China	--

Revision History  

• Version 1.0: 2025-10-08
  Type: Initial release