9J94 | pdb_00009j94

Native GluA1/GluA4-CNIH3 complex in active state

PDB DOI: https://doi.org/10.2210/pdb9J94/pdb
EM Map EMD-61252: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Sus scrofa
Mutation(s): No

Deposited: 2024-08-22 Released: 2026-03-04
Deposition Author(s): Li, X., Li, R., Wei, Y., Zhao, Y.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.65 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Native GluA1/GluA4-CNIH3 complex in active state

Li, X., Li, R., Wei, Y., Zhao, Y.

To be published.

Macromolecule Content

Total Structure Weight: 479.51 kDa
Atom Count: 16,884
Modeled Residue Count: 2,096
Deposited Residue Count: 4,216
Unique protein chains: 3

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cornichon family AMPA receptor auxiliary protein 3	A [auth F], B [auth E], C [auth G], D [auth H]	159	Sus scrofa	Mutation(s): 0
UniProt
Find proteins for A0A287BJP0 (Sus scrofa) Explore A0A287BJP0 Go to UniProtKB: A0A287BJP0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A287BJP0
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Glutamate receptor	E [auth A], H [auth C]	906	Sus scrofa	Mutation(s): 0
UniProt
Find proteins for A0A286ZS63 (Sus scrofa) Explore A0A286ZS63 Go to UniProtKB: A0A286ZS63
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A286ZS63
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Glutamate receptor	F [auth B], G [auth D]	884	Sus scrofa	Mutation(s): 0
UniProt
Find proteins for I3L8N9 (Sus scrofa) Explore I3L8N9 Go to UniProtKB: I3L8N9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	I3L8N9
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
A1EA4 (Subject of Investigation/LOI) Query on A1EA4 Download Ideal Coordinates CCD File SDF format, chain P [auth C] SDF format, chain M [auth D] SDF format, chain L [auth B] SDF format, chain J [auth A] MOL2 format, chain P [auth C] MOL2 format, chain M [auth D] MOL2 format, chain L [auth B] MOL2 format, chain J [auth A] mmCIF format, chain P [auth C] mmCIF format, chain M [auth D] mmCIF format, chain L [auth B] mmCIF format, chain J [auth A]	J [auth A], L [auth B], M [auth D], P [auth C]	(3~{R})-3-[(1~{S},2~{S},4~{S})-2-bicyclo[2.2.1]hept-5-enyl]-6-chloranyl-1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-1$l^{6},2,4-benzothiadiazine-7-sulfonamide C₁₄ H₁₆ Cl N₃ O₄ S₂ BOCUKUHCLICSIY-RSVXVWGFSA-N		Interactions Focus chain J [auth A] Focus chain L [auth B] Focus chain M [auth D] Focus chain P [auth C] Interactions & Density Focus chain J [auth A] Focus chain L [auth B] Focus chain M [auth D] Focus chain P [auth C]
GGL (Subject of Investigation/LOI) Query on GGL Download Ideal Coordinates CCD File SDF format, chain O [auth C] SDF format, chain N [auth D] SDF format, chain K [auth B] SDF format, chain I [auth A] MOL2 format, chain O [auth C] MOL2 format, chain N [auth D] MOL2 format, chain K [auth B] MOL2 format, chain I [auth A] mmCIF format, chain O [auth C] mmCIF format, chain N [auth D] mmCIF format, chain K [auth B] mmCIF format, chain I [auth A]	I [auth A], K [auth B], N [auth D], O [auth C]	GAMMA-L-GLUTAMIC ACID C₅ H₉ N O₄ WHUUTDBJXJRKMK-VKHMYHEASA-N		Interactions Focus chain I [auth A] Focus chain K [auth B] Focus chain N [auth D] Focus chain O [auth C] Interactions & Density Focus chain I [auth A] Focus chain K [auth B] Focus chain N [auth D] Focus chain O [auth C]