9J4E | pdb_00009j4e

Cryo-EM structure of P25alpha full-length fibril


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.32 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation 3D Report Full Report

Validation slider image for 9J4E

This is version 1.1 of the entry. See complete history

Literature

TPPP/p25 amyloid seeding activity as a specific biomarker for multiple system atrophy.

Zeng, S.Zhang, S.Zhang, S.Fan, Y.Xia, W.Chen, F.Huang, C.Lv, S.Lu, J.Sun, Y.Liu, K.Li, Y.Zhang, Y.Wang, J.Liu, C.Li, D.

(2026) Cell 

  • DOI: https://doi.org/10.1016/j.cell.2026.04.050
  • Primary Citation Related Structures: 
    9J4D, 9J4E, 9J4F

  • PubMed Abstract: 

    Detection of α-synuclein (α-syn) amyloid seeds in human biofluids has attracted great interest for clinical diagnosis of synucleinopathies. However, as a common biomarker, α-syn lacks specificity in reliably differentiating distinct disorders. Here, we report tubulin polymerization promoting protein (TPPP/p25) as a cerebrospinal fluid (CSF) biomarker for the specific diagnosis of multiple system atrophy (MSA). We demonstrate that native TPPP/p25 is self-protected against amyloid aggregation, while disease-related mutation disrupts this protection, triggering TPPP/p25 aggregation. Cryo-electron microscopy (cryo-EM) analysis reveals that the well-folded core domain (CORE) undergoes large conformational changes to mediate amyloid formation. Based on this insight, we developed a seed amplification assay using a minimized CORE (miniCORE) monomer, which detects TPPP/p25 amyloid seeds in CSF and robustly differentiates MSA from Parkinson's disease (PD) and other neurodegenerative diseases. Our findings establish misfolded TPPP/p25 as a promising, specific biomarker in biofluids for MSA diagnosis.


  • Organizational Affiliation
    • Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200030, China; Zhangjiang Institute for Advanced Study, Shanghai Jiao Tong University, Shanghai 200240, China.

Macromolecule Content 

  • Total Structure Weight: 142.44 kDa 
  • Atom Count: 1,758 
  • Modeled Residue Count: 222 
  • Deposited Residue Count: 1,314 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Tubulin polymerization-promoting protein219Homo sapiensMutation(s): 0 
Gene Names: TPPPTPPP1
EC: 3.6.5
UniProt & NIH Common Fund Data Resources
Find proteins for O94811 (Homo sapiens)
Explore O94811 
Go to UniProtKB:  O94811
PHAROS:  O94811
GTEx:  ENSG00000171368 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO94811
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.32 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2025-08-13
    Type: Initial release
  • Version 1.1: 2026-06-03
    Changes: Data collection, Database references