9I65 | pdb_00009i65

Recombinant F-ENA-2 fibers


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation 3D Report Full Report

Validation slider image for 9I65

This is version 1.1 of the entry. See complete history

Literature

Cryo-EM identifies F-ENA of Bacillus thuringiensis as a widespread family of endospore appendages across Firmicutes.

Sleutel, M.Sogues, A.Van Gerven, N.Jonsmoen, U.L.Van Molle, I.Fislage, M.Theunissen, L.D.Bellis, N.F.Baquero, D.P.Egelman, E.H.Krupovic, M.Wang, F.Aspholm, M.Remaut, H.

(2025) Nat Commun 16: 7652-7652

  • DOI: https://doi.org/10.1038/s41467-025-62896-3
  • Primary Citation Related Structures: 
    9HZE, 9I65, 9N0B

  • PubMed Abstract: 

    For over 100 years, Bacillus thuringiensis (Bt) has been used as an agricultural biopesticide to control pests caused by insect species in the orders of Lepidoptera, Diptera, and Coleoptera. Under nutrient starvation, Bt cells differentiate into spores and associated toxin crystals that can adopt biofilm-like aggregates. We reveal that such Bt spore/toxin biofilms are embedded in a fibrous extrasporal matrix, and using cryoID, we resolved the structure and molecular identity of an uncharacterized type of pili, referred to here as Fibrillar ENdospore Appendages or F-ENA. F-ENA are monomolecular protein filaments anchored to the exosporium and tipped with a flexible fibrillum. Phylogenetic and structural analyses reveal that F-ENA are conserved in Bacilli and Clostridia, featuring head-neck domains with β-barrel necks that interlock via N-terminal hook peptides. In Bacillus, two collagen-like proteins (F-Anchor and F-BclA), respectively, tether F-ENA and form the distal tip. Sedimentation assays suggest F-ENA promotes spore clustering via F-BclA contacts and/or filament bundling.


  • Organizational Affiliation
    • Structural Biology Brussels, Vrije Universiteit Brussel, Brussels, Belgium. Mike.Sleutel@vub.be.

Macromolecule Content 

  • Total Structure Weight: 120.81 kDa 
  • Atom Count: 8,433 
  • Modeled Residue Count: 1,215 
  • Deposited Residue Count: 1,224 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
DUF4183 domain-containing protein136Cohnella sp. OV330Mutation(s): 0 
Gene Names: SAMN05216312_11547
UniProt
Find proteins for A0ACD6BAK3 (Cohnella sp. OV330)
Explore A0ACD6BAK3 
Go to UniProtKB:  A0ACD6BAK3
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0ACD6BAK3
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.10 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Research Foundation - Flanders (FWO)BelgiumG043021N

Revision History  (Full details and data files)

  • Version 1.0: 2025-03-12
    Type: Initial release
  • Version 1.1: 2025-09-10
    Changes: Data collection, Database references